RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 CCSER2Q9H7U1 834 aa17.32■□□□□ 0.36
CHGA-201ENST00000216492 PLLPQ9Y342 182 aa17.32■□□□□ 0.36
CHGA-201ENST00000216492 YIPF1Q9Y548 306 aa17.32■□□□□ 0.36
CHGA-201ENST00000216492 LCHNA4D1U4 455 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 CXorf49A8MYA2 514 aaPredicted RBP17.31■□□□□ 0.36
CHGA-201ENST00000216492 DNAJC6O75061 913 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 CNPP09543 421 aaKnown RBP17.31■□□□□ 0.36
CHGA-201ENST00000216492 CNTFP26441 200 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 MLLT6P55198 1093 aaPredicted RBP17.31■□□□□ 0.36
CHGA-201ENST00000216492 CDK16Q00536 496 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 ANKRD20A3Q5VUR7 823 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 RWDD4Q6NW29 188 aaKnown RBP17.31■□□□□ 0.36
CHGA-201ENST00000216492 TCEAL8Q8IYN2 117 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 PDZD8Q8NEN9 1154 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 SP7Q8TDD2 431 aaPredicted RBP17.31■□□□□ 0.36
CHGA-201ENST00000216492 OVCA2Q8WZ82 227 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 C1orf74Q96LT6 269 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 LGMNQ99538 433 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 LBHD1Q9BQE6 289 aaPredicted RBP17.31■□□□□ 0.36
CHGA-201ENST00000216492 HTATIP2Q9BUP3 242 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 HEY2Q9UBP5 337 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 PCDHA11Q9Y5I1 949 aa17.31■□□□□ 0.36
CHGA-201ENST00000216492 FAM159BA6NKW6 160 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 CCDC22O60826 627 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 BMPR1AP36894 532 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 TWF1Q12792 350 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 VEPH1Q14D04 833 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 PDK1Q15118 436 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 TRIP4Q15650 581 aaPredicted RBP17.3■□□□□ 0.36
CHGA-201ENST00000216492 FAM182AQ5T1J6 154 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 ZNF534Q76KX8 674 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 CCNYQ8ND76 341 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 SIGLEC10Q96LC7 697 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 MYRFLQ96LU7 910 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 TMEM120AQ9BXJ8 343 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 MTIF3Q9H2K0 278 aaKnown RBP17.3■□□□□ 0.36
CHGA-201ENST00000216492 MAFFQ9ULX9 164 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 A0A0A0MRY4 1105 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 SLC12A8A0AV02 714 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 ZNF840PA6NDX5 716 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 SPATA31D3P0C874 917 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 MLNP12872 115 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 ATP5C1P36542 298 aaKnown RBP17.3■□□□□ 0.36
CHGA-201ENST00000216492 AP1B1Q10567 949 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 ACCSLQ4AC99 568 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 SNX30Q5VWJ9 437 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 SPATA31D4Q6ZUB0 917 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 CYS1Q717R9 158 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 RAB3IL1Q8TBN0 382 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 NSMCE1Q8WV22 266 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 SPATA13Q96N96 652 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 CDK5RAP1Q96SZ6 601 aaKnown RBP17.3■□□□□ 0.36
CHGA-201ENST00000216492 PRDM12Q9H4Q4 367 aa17.3■□□□□ 0.36
CHGA-201ENST00000216492 PPP1R12AO14974 1030 aaPredicted RBP17.29■□□□□ 0.36
CHGA-201ENST00000216492 RFPL1O75677 317 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 DLDP09622 509 aaKnown RBP17.29■□□□□ 0.36
CHGA-201ENST00000216492 EPHB3P54753 998 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 CTC1Q2NKJ3 1217 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 WASHC2DQ5SRD0 308 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 DNAJB7Q7Z6W7 309 aaPredicted RBP17.29■□□□□ 0.36
CHGA-201ENST00000216492 TP53INP2Q8IXH6 220 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 ATP6V0D2Q8N8Y2 350 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 N4BP2L2Q92802 583 aaPredicted RBP17.29■□□□□ 0.36
CHGA-201ENST00000216492 SKA1Q96BD8 255 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 C7orf26Q96N11 449 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 TLE6Q9H808 572 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 PLAC1Q9HBJ0 212 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 TRPM5Q9NZQ8 1165 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 RAD54BQ9Y620 910 aa17.29■□□□□ 0.36
CHGA-201ENST00000216492 NCAM2O15394 837 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 TGM5O43548 720 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
CHGA-201ENST00000216492 HMBSP08397 361 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 HTR7P34969 479 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 SERPINB6P35237 376 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 TUBP50607 506 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 KPNA1P52294 538 aaPredicted RBP17.28■□□□□ 0.36
CHGA-201ENST00000216492 KRT72Q14CN4 511 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 TLDC1Q6P9B6 456 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 CDHR3Q6ZTQ4 885 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 CCNJLQ8IV13 435 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 NPWQ8N729 165 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 FAM13CQ8NE31 585 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 DPF3Q92784 378 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 E2F7Q96AV8 911 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 BTN2A3PQ96KV6 586 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 ANKRD27Q96NW4 1050 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 NACA2Q9H009 215 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 EIF2B3Q9NR50 452 aaKnown RBP17.28■□□□□ 0.36
CHGA-201ENST00000216492 SMYD2Q9NRG4 433 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 DNMT3LQ9UJW3 386 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 INSL5Q9Y5Q6 135 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 NR2E3Q9Y5X4 410 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.28■□□□□ 0.36
CHGA-201ENST00000216492 E9PAM4 449 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 SERPINB3P29508 390 aa17.28■□□□□ 0.36
CHGA-201ENST00000216492 CRHR1P34998 444 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms