RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 LHX6Q9UPM6 363 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 CELSR3Q9NYQ7 3312 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 GOLGA8SH3BPF8 625 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 K7ERQ8 282 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 F9P00740 461 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 CTSLP07711 333 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 RRM1P23921 792 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 FLT3P36888 993 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 KRT83P78385 493 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 BNIP3Q12983 259 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 DNAJC3Q13217 504 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 SMAD1Q15797 465 aaKnown RBP15.37■□□□□ 0.05
UPK3A-201ENST00000216211 SLC25A52Q3SY17 297 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 TRNP1Q6NT89 227 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 LRRC31Q6UY01 552 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 TFAP2DQ7Z6R9 452 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 NOP9Q86U38 636 aaKnown RBP15.37■□□□□ 0.05
UPK3A-201ENST00000216211 SPATS2Q86XZ4 545 aaKnown RBP15.37■□□□□ 0.05
UPK3A-201ENST00000216211 EID2Q8N6I1 236 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 ATP11CQ8NB49 1132 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 PGAP3Q96FM1 320 aaPredicted RBP15.37■□□□□ 0.05
UPK3A-201ENST00000216211 CNDP2Q96KP4 475 aaKnown RBP15.37■□□□□ 0.05
UPK3A-201ENST00000216211 NAA15Q9BXJ9 866 aaKnown RBP15.37■□□□□ 0.05
UPK3A-201ENST00000216211 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 MPP6Q9NZW5 540 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 HS3ST2Q9Y278 367 aa15.37■□□□□ 0.05
UPK3A-201ENST00000216211 CHD5Q8TDI0 1954 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 A0A0D9SEW6 157 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 DRGXA6NNA5 263 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 ENC1O14682 589 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 YKT6O15498 198 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 SMAD6O43541 496 aaKnown RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 LDOC1O95751 146 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 MMEP08473 750 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 UCHL3P15374 230 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 GLDCP23378 1020 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 EPHA8P29322 1005 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 SCNN1AP37088 669 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 ARRB1P49407 418 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 C19orf48Q6RUI8 117 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 LINGO4Q6UY18 593 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 SETD3Q86TU7 594 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 TRIM69Q86WT6 500 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 MFSD2AQ8NA29 543 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 CPA5Q8WXQ8 436 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 ARRDC3Q96B67 414 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 CFAP57Q96MR6 1250 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 C2orf49Q9BVC5 232 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 CA5BQ9Y2D0 317 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
UPK3A-201ENST00000216211 ARID1BQ8NFD5 2236 aaPredicted RBP15.36■□□□□ 0.05
UPK3A-201ENST00000216211 TRPM6Q9BX84 2022 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 TRABD2BA6NFA1 517 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 E9PAM4 449 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 RNF103O00237 685 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 RNGTTO60942 597 aaKnown RBP15.35■□□□□ 0.05
UPK3A-201ENST00000216211 SRGAP2O75044 1071 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 HOXB3P14651 431 aaPredicted RBP15.35■□□□□ 0.05
UPK3A-201ENST00000216211 OR1E1P30953 314 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 CHRNA3P32297 505 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 ZNF165P49910 485 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 CLDN6P56747 220 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 TAS2R38P59533 333 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 CAMK2BQ13554 666 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 SETMARQ53H47 684 aaPredicted RBP15.35■□□□□ 0.05
UPK3A-201ENST00000216211 TCP11X2Q5H9J9 407 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 ARTNQ5T4W7 220 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 PIP5KL1Q5T9C9 394 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 CHST14Q8NCH0 376 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 OR7D4Q8NG98 312 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 OR2A12Q8NGT7 310 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 EPS8L1Q8TE68 723 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 KLK6Q92876 244 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 PDLIM2Q96JY6 352 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 C1orf74Q96LT6 269 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 MYOCQ99972 504 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 BPIFA3Q9BQP9 254 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 STK33Q9BYT3 514 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 ERVMER34-1Q9H9K5 563 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 PREBQ9HCU5 417 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 TMEM59LQ9UK28 342 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 DMTF1Q9Y222 760 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 RAXQ9Y2V3 346 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 GPSM3Q9Y4H4 160 aa15.35■□□□□ 0.05
UPK3A-201ENST00000216211 IGLV3-10A0A075B6K4 115 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 F8VZ95 297 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 KPNA3O00505 521 aaPredicted RBP15.34■□□□□ 0.05
UPK3A-201ENST00000216211 ENDOD1O94919 500 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
UPK3A-201ENST00000216211 NUDT1P36639 197 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 RXRGP48443 463 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 NOMO3P69849 1222 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 CYP4F3Q08477 520 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 STAT4Q14765 748 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 IQCB1Q15051 598 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 C6orf118Q5T5N4 469 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
UPK3A-201ENST00000216211 C22orf39Q6P5X5 142 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms