RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 ASLP04424 464 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 ERCC2P18074 760 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 NELFEP18615 380 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 RPL5P46777 297 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 ARHGAP1Q07960 439 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 ZNF484Q5JVG2 852 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 METTL21CQ5VZV1 264 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 C9orf57Q5W0N0 161 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 IFNLR1Q8IU57 520 aaPredicted RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 ZFP28Q8NHY6 868 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 DGCR14Q96DF8 476 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 APBA2Q99767 749 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 PRPF19Q9UMS4 504 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 RAP2CQ9Y3L5 183 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 MRPL42Q9Y6G3 142 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 hCG_2014768A0A024R1R8 64 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 MPOP05164 745 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 PTPN1P18031 435 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 PPARGP37231 505 aaPredicted RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 DPYSQ14117 519 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
RCN1-201ENST00000054950 LSMEM2Q8N112 164 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 SNX31Q8N9S9 440 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 SNX27Q96L92 541 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 SERPINI1Q99574 410 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 SEMA6AQ9H2E6 1030 aa20.62■□□□□ 0.89
RCN1-201ENST00000054950 DCLK1O15075 740 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 TTLL4Q14679 1199 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 KCTD2Q14681 263 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 TICAM1Q8IUC6 712 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 SLC41A1Q8IVJ1 513 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 C1QTNF1Q9BXJ1 281 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 DRC3Q9H069 523 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 CDHR5Q9HBB8 845 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 SETD4Q9NVD3 440 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 HNRNPRO43390 633 aaKnown RBP20.61■□□□□ 0.89
RCN1-201ENST00000054950 RNASEH2AO75792 299 aaKnown RBP20.61■□□□□ 0.89
RCN1-201ENST00000054950 NFKB1P19838 968 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 FGFR3P22607 806 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 HOXA11P31270 313 aaPredicted RBP20.61■□□□□ 0.89
RCN1-201ENST00000054950 POU5F1BQ06416 359 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 NRF1Q16656 503 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 LIPMQ5VYY2 423 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 AMIGO2Q86SJ2 522 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 RP9Q8TA86 221 aaKnown RBP20.61■□□□□ 0.89
RCN1-201ENST00000054950 SGF29Q96ES7 293 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 CNDP1Q96KN2 507 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 PHF12Q96QT6 1004 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 ELP3Q9H9T3 547 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 CASS4Q9NQ75 786 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 HSFX1Q9UBD0 423 aa20.61■□□□□ 0.89
RCN1-201ENST00000054950 RUVBL2Q9Y230 463 aaKnown RBP20.61■□□□□ 0.89
RCN1-201ENST00000054950 PCSK6P29122 969 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 USP46P62068 366 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 NSUN2Q08J23 767 aaKnown RBP eCLIP20.6■□□□□ 0.89
RCN1-201ENST00000054950 PAFAH1B3Q15102 231 aaKnown RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 GK5Q6ZS86 529 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 UNC93AQ86WB7 457 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 PCDH20Q8N6Y1 951 aaKnown RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 CCNYL1Q8N7R7 359 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 ATP6V1E2Q96A05 226 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 FAM49AQ9H0Q0 323 aaPredicted RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 ZNF385DQ9H6B1 395 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 IRAK4Q9NWZ3 460 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 ATXN10Q9UBB4 475 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 RBPJLQ9UBG7 517 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 COPG1Q9Y678 874 aaKnown RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 HDCP19113 662 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 IGFBP6P24592 240 aaPredicted RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 ART3Q13508 389 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 MAP7Q14244 749 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 USP10Q14694 798 aaKnown RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 ZYG11AQ6WRX3 759 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 FSTL5Q8N475 847 aaPredicted RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 FAM81AQ8TBF8 368 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 RBM38Q9H0Z9 239 aaKnown RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 PCDHAC1Q9H158 963 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 RCOR3Q9P2K3 495 aaPredicted RBP20.6■□□□□ 0.89
RCN1-201ENST00000054950 RAB26Q9ULW5 256 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 CDYLQ9Y232 598 aa20.6■□□□□ 0.89
RCN1-201ENST00000054950 CSPG5O95196 566 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 CYP2C8P10632 490 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 GABRB3P28472 473 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 RGS2P41220 211 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 RPL26P61254 145 aaKnown RBP20.59■□□□□ 0.89
RCN1-201ENST00000054950 ZBTB6Q15916 424 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 TBC1D25Q3MII6 688 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 RPS27LQ71UM5 84 aaKnown RBP20.59■□□□□ 0.89
RCN1-201ENST00000054950 PGAM4Q8N0Y7 254 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 BEST2Q8NFU1 509 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 SLC7A14Q8TBB6 771 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 USP33Q8TEY7 942 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 SREK1Q8WXA9 508 aaKnown RBP20.59■□□□□ 0.89
RCN1-201ENST00000054950 MPHOSPH6Q99547 160 aaKnown RBP20.59■□□□□ 0.89
RCN1-201ENST00000054950 SENP6Q9GZR1 1112 aaPredicted RBP20.59■□□□□ 0.89
RCN1-201ENST00000054950 SNX25Q9H3E2 840 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 EPB41L1Q9H4G0 881 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 PREBQ9HCU5 417 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 SBF1O95248 1867 aa20.59■□□□□ 0.89
RCN1-201ENST00000054950 DNAJC25-GNG10A0A024R161 153 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms