RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 BDH2Q9BUT1 245 aa23.5■■□□□ 1.35
TARBP1-201ENST00000040877 ZDHHC6Q9H6R6 413 aa23.5■■□□□ 1.35
TARBP1-201ENST00000040877 KCNK4Q9NYG8 393 aa23.5■■□□□ 1.35
TARBP1-201ENST00000040877 C1QTNF3-AMACRE9PGA6 284 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 USP12O75317 370 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 ANXA5P08758 320 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 ZBTB48P10074 688 aaPredicted RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 ARL15Q9NXU5 204 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 hCG_1818297A0A087WSY0 165 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 CCDC154A6NI56 674 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 MRASO14807 208 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 B4GALT5O43286 388 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 PARNO95453 639 aaKnown RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 HPCAL1P37235 193 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 HIRAP54198 1017 aaPredicted RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 FRG1Q14331 258 aaKnown RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 ZNF544Q6NX49 715 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 HGH1Q9BTY7 390 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 FAM220BPB1ANY3 271 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 SPTLC1O15269 473 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 RPL22P35268 128 aaKnown RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 TBCELQ5QJ74 424 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 STXBP5Q5T5C0 1151 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 MAGEB10Q96LZ2 347 aaPredicted RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 DDX20Q9UHI6 824 aaKnown RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 CD86P42081 329 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 IFI35P80217 286 aaPredicted RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 TMEM132CQ8N3T6 1108 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 BTBD10Q9BSF8 475 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 OXCT2Q9BYC2 517 aaPredicted RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 ST6GALNAC4Q9H4F1 302 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 DDX28Q9NUL7 540 aaKnown RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 FBXO10Q9UK96 956 aa23.49■■□□□ 1.35
TARBP1-201ENST00000040877 MRPS23Q9Y3D9 190 aaKnown RBP23.49■■□□□ 1.35
TARBP1-201ENST00000040877 FSCN2O14926 492 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 MMP3P08254 477 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 NFKB1P19838 968 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 RPL14P50914 215 aaKnown RBP23.48■■□□□ 1.35
TARBP1-201ENST00000040877 GLTPD2A6NH11 291 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ALDH9A1P49189 494 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ACSM2AQ08AH3 577 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ACSM2BQ68CK6 577 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ZFP1Q6P2D0 407 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 RIPOR1Q6ZS17 1223 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 GPR141Q7Z602 305 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 CYP4Z2PQ8N1L4 340 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ATG16L2Q8NAA4 619 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 NIFKQ9BYG3 293 aaKnown RBP23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ARSHQ5FYA8 562 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 DHFR2Q86XF0 187 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 CENPTQ96BT3 561 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 PRDM12Q9H4Q4 367 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 TDRKHQ9Y2W6 561 aaKnown RBP23.48■■□□□ 1.35
TARBP1-201ENST00000040877 FGF19O95750 216 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ICAM3P32942 547 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 CTNNB1P35222 781 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 SAMD4BQ5PRF9 694 aaKnown RBP23.48■■□□□ 1.35
TARBP1-201ENST00000040877 C9orf57Q5W0N0 161 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 MREGQ8N565 214 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 CXorf40AQ8TE69 158 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 UNKQ9C0B0 810 aaKnown RBP23.48■■□□□ 1.35
TARBP1-201ENST00000040877 RABGEF1Q9UJ41 708 aa23.48■■□□□ 1.35
TARBP1-201ENST00000040877 ASGR1P07306 291 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 PABPC1P11940 636 aaKnown RBP23.47■■□□□ 1.35
TARBP1-201ENST00000040877 CXCR2P25025 360 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ADRA1DP25100 572 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 TSHZ1Q6ZSZ6 1077 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 STRADAQ7RTN6 431 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 IRF2BP2Q7Z5L9 587 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 UGT2B28Q9BY64 529 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ACP6Q9NPH0 428 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 PDE2AO00408 941 aaPredicted RBP23.47■■□□□ 1.35
TARBP1-201ENST00000040877 EPHB6O15197 1021 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 TRAF2Q12933 501 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 MOB2Q70IA6 237 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ZSCAN5DPP0CG00 497 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 THOP1P52888 689 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ACTRT2Q8TDY3 377 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 MT-CO1P00395 513 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 GRK4P32298 578 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ZCWPW2Q504Y3 356 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 PTF1AQ7RTS3 328 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 TRAPPC5Q8IUR0 188 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 LPPQ93052 612 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ASB8Q9H765 288 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 USE1Q9NZ43 259 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 CRYL1Q9Y2S2 319 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 CNOT3O75175 753 aaKnown RBP23.47■■□□□ 1.35
TARBP1-201ENST00000040877 GNRH1P01148 92 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 FLT3LGP49771 235 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 NCF4Q15080 339 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 RD3Q7Z3Z2 195 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 RNPEPQ9H4A4 650 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 HPS4Q9NQG7 708 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ADPRHL2Q9NX46 363 aa23.47■■□□□ 1.35
TARBP1-201ENST00000040877 ETS1P14921 441 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 PHACTR1Q9C0D0 580 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 SAC3D1A6NKF1 404 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 TPP1O14773 563 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 TCF3P15923 654 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms