RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cacng4Q9JJV4 327 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Aldoart1A6ZI46 419 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ccdc149F6V035 524 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Epha3P29319 983 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Spc25Q3UA16 226 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tmed1Q3V009 227 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fam160a1Q505K2 1081 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ndrg1Q62433 394 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Glra2Q7TNC8 452 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Orai2Q8BH10 250 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Zfp831A2ADM8 1628 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm3526E9PZM0 191 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Igf2bp1O88477 577 aaKnown RBP12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dpf3P58269 378 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Polr2lP62876 67 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ChfrQ810L3 664 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cnksr3Q8BMA3 555 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Taf5Q8C092 801 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 HibchQ8QZS1 385 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Smim11aQ99J19 55 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Q9CQC3 228 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fip1l1Q9D824 581 aaKnown RBP12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mbd1Q9Z2E2 636 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fam46dB1ATX6 390 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ism2D3Z6A3 493 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cd151O35566 253 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Sem1P60897 70 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Acsbg2Q2XU92 667 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Q3TYS2 187 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ubtfl1Q3USZ2 394 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Papss1Q60967 624 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Vtcn1Q7TSP5 283 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tsga13Q9DA17 273 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hao1Q9WU19 370 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 4930558K02RikE0CXC6 182 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Prdm15E9Q8T2 1174 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Surf2P09926 257 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dok6Q2MHE5 331 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gpr65Q61038 337 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nab1Q61122 486 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nemp1Q6ZQE4 437 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ClyblQ8R4N0 338 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Aim2Q91VJ1 354 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nuf2Q99P69 463 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tas1r1Q99PG6 842 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ddx21Q9JIK5 851 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fkbp1bQ9Z2I2 108 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rpl9-ps1S4R1R7 191 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ltn1Q6A009 1767 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Wfdc16A2A5H4 111 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm13212B1ASQ7 799 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Maml3D4QGC2 1135 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 R3hdm1E9Q9Q2 1135 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gsg1l2M0QWL6 290 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cer1O55233 272 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Psmc3O88685 442 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 PcnaP17918 261 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 GcP21614 476 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 RxraP28700 467 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pdha1P35486 390 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tarbp2P97473 365 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fam35aQ3UEN2 891 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Satb1Q60611 764 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cntn2Q61330 1040 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Irak4Q8R4K2 459 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ppa2Q91VM9 330 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mtif3Q9CZD5 276 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fam187aQ9D3R5 417 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Eif4e3Q9DBB5 207 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 PllpQ9DCU2 182 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 GabrqQ9JLF1 638 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 XkQ9QXY7 446 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Glipr1l3A0A1W2P7V2 236 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pramef20B1ARV6 477 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Coro1aO89053 461 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hoxc13P50207 328 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Il1rapl1P59823 695 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Srrm3Q80WV7 648 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mettl21cQ8BLU2 248 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 CherpQ8CGZ0 936 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ankrd54Q91WK7 299 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 KmoQ91WN4 479 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pcdhgb5Q91XX5 926 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rpl17Q9CPR4 184 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Sike1Q9CPR7 207 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Olfr706Q9EPF8 316 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 A630010A05RikA9C473 232 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm4450E9Q007 373 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Akap10O88845 662 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 IgfalsP70389 603 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Psmb4P99026 264 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hsd3b4Q61767 373 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 RbfaQ6P3B9 350 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cd300aQ6SJQ0 318 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hus1Q8BQY8 280 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Wdr26Q8C6G8 641 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slfn5Q8CBA2 884 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dennd1cQ8CFK6 786 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 FocadA2AKG8 1798 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ttc7bE9Q6P5 843 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms