RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Dclk2Q6PGN3 756 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 DstykQ6XUX1 927 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Arhgap25Q8BYW1 648 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ccdc90bQ8C3X2 256 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Fbxo33Q8VE08 562 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Pth2rQ91V95 546 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Spats2lQ91WJ7 558 aaKnown RBP18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Tnfaip8l2Q9D8Y7 184 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gm1141B9EJU1 475 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Lamp1P11438 406 aaKnown RBP18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Rab17P35292 214 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 TankP70347 448 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Zbtb8osQ505B7 168 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Mfsd3Q5U419 412 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gpr65Q61038 337 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Abcd2Q61285 741 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ptpn14Q62130 1189 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Bhlhe22Q8C6A8 355 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 NeproQ8R2U2 564 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Creld1Q91XD7 420 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Fuca1Q99LJ1 452 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 MecrQ9DCS3 373 aa18.1■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gm43302L7N1X8 611 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Htr2cP34968 459 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Brcc3P46737 291 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Oaz1P54369 227 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Olfm3P63056 478 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gbp10Q000W5 611 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Coq10bQ3THF9 240 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Kcna4Q61423 654 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Nrg1Q6DR99 700 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Sel1l3Q80TS8 1137 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ppp4r1Q8K2V1 951 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Tbc1d19Q8VDV7 526 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Trim54Q9ERP3 366 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gfra4Q9JJT2 260 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Cdc42ep5Q9Z0X0 150 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 FgaE9PV24 789 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Inpp5aE9QAS7 422 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Prim2P33610 505 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Pik3r6Q3U6Q4 756 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Xpo1Q6P5F9 1071 aaKnown RBP18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 PolnQ7TQ07 864 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Rnf38Q8BI21 518 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Arhgef33Q8BW86 850 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 TdrpQ8C5P7 182 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Nlrp4bQ8C6J9 863 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Snapc1Q8K0S9 389 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Rem2Q8VEL9 341 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ssxb1Q9CPU1 170 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Rnaseh2aQ9CWY8 301 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Kdm8Q9CXT6 414 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Fndc8Q9D2H8 321 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Tdp2Q9JJX7 370 aa18.09■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ttc30a2A2AKQ8 664 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Zbtb10E9Q8X5 861 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Olfr603L7N1Y4 312 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ptpn20O55082 426 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ap2a1P17426 977 aaKnown RBP18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Ccnb1P24860 430 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Dpep1P31428 410 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Vps4bP46467 444 aaKnown RBP18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gabrb3P63080 473 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 ScinQ60604 715 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Gstt1Q64471 240 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Cpa4Q6P8K8 420 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Rfx4Q7TNK1 735 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Zdhhc17Q80TN5 632 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Sgpl1Q8R0X7 568 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Vopp1Q8R1C3 172 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Cog4Q8R1U1 785 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 FktnQ8R507 461 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Tcf7l2Q924A0 459 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Chrnb2Q9ERK7 501 aa18.08■□□□□ 0.49
Ptpra-201ENSMUST00000028769 Msr1P30204 458 aaKnown RBP18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Rpl5P47962 297 aaKnown RBP18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Slc12a1P55014 1095 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Atp5jP97450 108 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Eps8Q08509 821 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Zfp956Q3UZY6 572 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Prrt3Q6PE13 971 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Tas2r115Q7M719 310 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Clec18aQ7TSQ1 534 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Reps2Q80XA6 521 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Snrnp27Q8K194 155 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 OscarQ8VBT3 265 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Tma16Q9CR02 221 aaKnown RBP18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Ifrd2Q9D8U0 441 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Spin2dB1B0R2 236 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Scd1P13516 355 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Tmem165P52875 323 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 B3gat3P58158 335 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 PrkcgP63318 697 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Vps51Q3UVL4 782 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Nomo1Q6GQT9 1214 aaKnown RBP18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Catsper1Q91ZR5 686 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Rin2Q9D684 903 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Cldn22Q9D7U6 220 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Ap4b1Q9WV76 738 aa18.08■□□□□ 0.48
Ptpra-201ENSMUST00000028769 P01641 117 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms