RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SLC6A4P31645 630 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 SLCO1A2P46721 670 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 PAPOLAP51003 745 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 MLLT1Q03111 559 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 WASHC5Q12768 1159 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 GPM6BQ13491 265 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 PRPSAP1Q14558 356 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 FASTKD3Q14CZ7 662 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TPSAB1Q15661 275 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 PARP6Q2NL67 630 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ALFQ53S48 1182 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 RABGAP1LQ5R372 815 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 NADSYN1Q6IA69 706 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 FAM109BQ6ICB4 259 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TIGD7Q6NT04 549 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 LILRA6Q6PI73 481 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ARHGAP36Q6ZRI8 547 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 RGS9BPQ6ZS82 235 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 EXOC3L1Q86VI1 746 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 PACS2Q86VP3 889 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ARHGAP12Q8IWW6 846 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 MAB21L3Q8N8X9 362 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 MAGEC3Q8TD91 643 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 NSMCE1Q8WV22 266 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CCT6BQ92526 530 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ARHGEF2Q92974 986 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CFAP36Q96G28 342 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TGS1Q96RS0 853 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CYP2S1Q96SQ9 504 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 DDX50Q9BQ39 737 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CERS4Q9HA82 394 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 SP110Q9HB58 689 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 MAN1C1Q9NR34 630 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ASAH2Q9NR71 780 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 SAMD15Q9P1V8 674 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 SLC24A2Q9UI40 661 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TRHDEQ9UKU6 1024 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CHMP2BQ9UQN3 213 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 MYO7AQ13402 2215 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 TRAV19A0A0A6YYK7 116 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 RASA4BC9J798 803 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SCAMP3O14828 347 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ALOX15BO15296 676 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ZBTB24O43167 697 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 PRPF4O43172 522 aaKnown RBP eCLIP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 RASA4O43374 803 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 RAMP2O60895 175 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 CCNB1P14635 433 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 EPCAMP16422 314 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 CDC25CP30307 473 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 OR1E1P30953 314 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 PHBP35232 272 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 IRS1P35568 1242 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ELK3P41970 407 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 NUMBP49757 651 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 LIG3P49916 1009 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 CLCN4P51793 760 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 NDST2P52849 883 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SMAD3P84022 425 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ITKQ08881 620 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SEMA5AQ13591 1074 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SPARCL1Q14515 664 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 POLD3Q15054 466 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 LONRF1Q17RB8 773 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ANO4Q32M45 955 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 TEX44Q53QW1 395 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SPDYAQ5MJ70 313 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF697Q5TEC3 545 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 TMEM150AQ86TG1 271 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF683Q8IZ20 524 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ATP11CQ8NB49 1132 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 MCUQ8NE86 351 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 FBXO36Q8NEA4 188 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 CKAP2Q8WWK9 683 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 HMCESQ96FZ2 354 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SAMD11Q96NU1 681 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SLC22A12Q96S37 553 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 VAT1Q99536 393 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 PRMT1Q99873 361 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SELENOSQ9BQE4 189 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 TACO1Q9BSH4 297 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 FRMD8Q9BZ67 464 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 TMEM248Q9NWD8 314 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 HCFC1R1Q9NWW0 138 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 IPO11Q9UI26 975 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 LSM7Q9UK45 103 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SMG5Q9UPR3 1016 aaKnown RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 SH3BP1Q9Y3L3 701 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 PCDHA11Q9Y5I1 949 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 IRAK3Q9Y616 596 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms