RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 RBM22Q9NW64 420 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■□□□ 12.6
CASC19-230ENST00000641421 UBP1Q9NZI7 540 aa10.87□□□□□ -0.67
CASC19-230ENST00000641421 ZFATQ9P243 1243 aa10.87□□□□□ -0.67
CASC19-230ENST00000641421 TXNDC16Q9P2K2 825 aa10.87□□□□□ -0.67
CASC19-230ENST00000641421 SLC17A6Q9P2U8 582 aa10.87□□□□□ -0.67
CASC19-230ENST00000641421 PPARGC1AQ9UBK2 798 aaKnown RBP10.87□□□□□ -0.67
CASC19-230ENST00000641421 PLLPQ9Y342 182 aa10.87□□□□□ -0.67
CASC19-230ENST00000641421 CDY1Q9Y6F8 540 aa10.87□□□□□ -0.67
CASC19-230ENST00000641421 MRPL42Q9Y6G3 142 aaKnown RBP10.87□□□□□ -0.67
CASC19-230ENST00000641421 TBX18O95935 607 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 IGLV3-27P01718 113 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 GSTA1P08263 222 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 HMBSP08397 361 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 ZDHHC11BP0C7U3 371 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 GP5P40197 560 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 SCTRP47872 440 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 KPNA1P52294 538 aaPredicted RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 NDST2P52849 883 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 TLE2Q04725 743 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 SPRED3Q2MJR0 410 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 USP41Q3LFD5 358 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 ACBD5Q5T8D3 534 aaPredicted RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 GRTP1Q5TC63 336 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
CASC19-230ENST00000641421 CDHR3Q6ZTQ4 885 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 OTOAQ7RTW8 1153 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 TMEM135Q86UB9 458 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 MIB1Q86YT6 1006 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 TRIM42Q8IWZ5 723 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.86□□□□□ -0.67
CASC19-230ENST00000641421 SPATA22Q8NHS9 363 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 TOX2Q96NM4 488 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 FICDQ9BVA6 458 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 TTLL2Q9BWV7 592 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 SLC13A1Q9BZW2 595 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 UBE2OQ9C0C9 1292 aaKnown RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 NOL6Q9H6R4 1146 aaKnown RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 TMEM248Q9NWD8 314 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 MTRRQ9UBK8 725 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 IPO11Q9UI26 975 aaKnown RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 SOX13Q9UN79 622 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 MYO18AQ92614 2054 aaKnown RBP10.86□□□□□ -0.67
CASC19-230ENST00000641421 TANC1Q9C0D5 1861 aa10.86□□□□□ -0.67
CASC19-230ENST00000641421 IGLV3-10A0A075B6K4 115 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 ZCWPW2A0A1B0GU75 182 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 DRGXA6NNA5 263 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 H0YHG0 523 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 ADAM12O43184 909 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 HLA-DQB2P05538 268 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 TROVE2P10155 538 aaKnown RBP eCLIP10.85□□□□□ -0.67
CASC19-230ENST00000641421 TPH1P17752 444 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 BGNP21810 368 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 TUFMP49411 452 aaKnown RBP10.85□□□□□ -0.67
CASC19-230ENST00000641421 RING1Q06587 406 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 MTA1Q13330 715 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 IKBKEQ14164 716 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 FAM133BQ5BKY9 247 aaKnown RBP10.85□□□□□ -0.67
CASC19-230ENST00000641421 RAP1GAP2Q684P5 730 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 SLC8B1Q6J4K2 584 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 FBXL22Q6P050 247 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 TFAP2DQ7Z6R9 452 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 GBP7Q8N8V2 638 aaPredicted RBP10.85□□□□□ -0.67
CASC19-230ENST00000641421 ARMC2Q8NEN0 867 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 IPMKQ8NFU5 416 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 THOC1Q96FV9 657 aaKnown RBP10.85□□□□□ -0.67
CASC19-230ENST00000641421 HMCESQ96FZ2 354 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 CEP295NLQ96MC4 621 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 CDK5RAP1Q96SZ6 601 aaKnown RBP10.85□□□□□ -0.67
CASC19-230ENST00000641421 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 CWH43Q9H720 699 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 CCSER2Q9H7U1 834 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 GGT7Q9UJ14 662 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
CASC19-230ENST00000641421 BACE2Q9Y5Z0 518 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 PSAT1Q9Y617 370 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 USH1CQ9Y6N9 552 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 SCN5AQ14524 2016 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 SHROOM3Q8TF72 1996 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
CASC19-230ENST00000641421 NUP205Q92621 2012 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 TPP1O14773 563 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 TLR5O60602 858 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 CNTN5O94779 1100 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 UBOX5O94941 541 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 EFEMP2O95967 443 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 ITGA2BP08514 1039 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 RPL17P18621 184 aaKnown RBP10.84□□□□□ -0.67
CASC19-230ENST00000641421 ATF6P18850 670 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 OR1D2P34982 312 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 PDE1BQ01064 536 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 SMAD1Q15797 465 aaKnown RBP10.84□□□□□ -0.67
CASC19-230ENST00000641421 ALFQ53S48 1182 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 KIAA1841Q6NSI8 718 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 PTPRN2Q92932 1015 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 FATE1Q969F0 183 aa10.84□□□□□ -0.67
CASC19-230ENST00000641421 IGSF8Q969P0 613 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms