RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DHRS4Q9BTZ2 278 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 LMAN2LQ9H0V9 348 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 SLC25A51Q9H1U9 297 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 GLOD4Q9HC38 313 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 CASS4Q9NQ75 786 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 ASAH2Q9NR71 780 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 NSMCE4AQ9NXX6 385 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 EURLQ9NYK6 297 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 RABGEF1Q9UJ41 708 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 SMG5Q9UPR3 1016 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 CHMP2BQ9UQN3 213 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 SNX10Q9Y5X0 201 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 NR2E3Q9Y5X4 410 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 OBSL1O75147 1896 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 ZBTB24O43167 697 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 FAM155BO75949 473 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 KRT37O76014 449 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 KRT38O76015 456 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 HMBSP08397 361 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 CORO1AP31146 461 aaKnown RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 MDH1P40925 334 aaKnown RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 EPHA5P54756 1037 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 GPX6P59796 221 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF177Q13360 481 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 FASTKD3Q14CZ7 662 aaKnown RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 LONRF1Q17RB8 773 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 RALGPS1Q5JS13 557 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 MPP7Q5T2T1 576 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 POTEHQ6S545 545 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 SLC26A11Q86WA9 606 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 ANKMY2Q8IV38 441 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 FAM217AQ8IXS0 508 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 LGI2Q8N0V4 545 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 CPXM2Q8N436 756 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 PDCD7Q8N8D1 485 aaKnown RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 DNAAF3Q8N9W5 541 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 HJURPQ8NCD3 748 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 POF1BQ8WVV4 589 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 SLC44A1Q8WWI5 657 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 SGSM3Q96HU1 749 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 CELF6Q96J87 481 aaKnown RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 SIGLEC10Q96LC7 697 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 AGAP3Q96P47 875 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 SMC6Q96SB8 1091 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 MRM3Q9HC36 420 aaKnown RBP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 RBM22Q9NW64 420 aaKnown RBP eCLIP9.92□□□□□ -0.82
PHGDH-215ENST00000641371 ZDHHC7Q9NXF8 308 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF212Q9UDV6 495 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 MAD1L1Q9Y6D9 718 aa9.92□□□□□ -0.82
PHGDH-215ENST00000641371 FAM237BA0A1B0GVD1 139 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 TCRBV9S1A1TA0A576 114 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 LINC01553A4QN01 128 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 C2orf71A6NGG8 1288 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 CCDC85CA6NKD9 419 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SMIM23A6NLE4 172 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 POC1B-GALNT4F8VUJ3 575 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF197O14709 1029 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 PRPF4O43172 522 aaKnown RBP eCLIP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 PRAMEF11O60813 436 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 USP1O94782 785 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ALDH1A2O94788 518 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 EPOP01588 193 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 RHOCP08134 193 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 KRT15P19012 456 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 PAMP19021 973 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 HDCP19113 662 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 NFKB1P19838 968 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 GABRR2P28476 465 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SSTR1P30872 391 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 HPDP32754 393 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 CD68P34810 354 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 GNA12Q03113 381 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ZBTB17Q13105 803 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SERINC3Q13530 473 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 GLIPR1L2Q4G1C9 344 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 MSS51Q4VC12 460 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 FAM133BQ5BKY9 247 aaKnown RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ARTNQ5T4W7 220 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 FAXCQ5TGI0 409 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 CASC4Q6P4E1 433 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 B4GALNT4Q76KP1 1039 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF534Q76KX8 674 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF354CQ86Y25 554 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 TMC8Q8IU68 726 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SH2D3CQ8N5H7 860 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SPPL3Q8TCT6 385 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 PEX13Q92968 403 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 XPO6Q96QU8 1125 aaKnown RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 TGS1Q96RS0 853 aaKnown RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 PAFAH2Q99487 392 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 FSD1LQ9BXM9 530 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 POLR1EQ9GZS1 481 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms