RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 BIN1O00499 593 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 SCAMP1O15126 338 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 SLC31A1O15431 190 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 ZBED1O96006 694 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 HLA-DRAP01903 254 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 SLC5A2P31639 672 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 CNTN1Q12860 1018 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 CUL4BQ13620 913 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 MORC3Q14149 939 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 MPP7Q5T2T1 576 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 AGBL4Q5VU57 503 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 BSPRYQ5W0U4 402 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 EFL1Q7Z2Z2 1120 aaKnown RBP10.02□□□□□ -0.81
PHGDH-212ENST00000641247 TRIM69Q86WT6 500 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 CFAP52Q8N1V2 620 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 CARNMT1Q8N4J0 409 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 KDM1BQ8NB78 822 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 FRS2Q8WU20 508 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 C7orf25Q9BPX7 421 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 UBXN6Q9BZV1 441 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 LRRC27Q9C0I9 530 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 NAT10Q9H0A0 1025 aaKnown RBP10.02□□□□□ -0.81
PHGDH-212ENST00000641247 SPTLC3Q9NUV7 552 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 DMAC2Q9NW81 257 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 DMTF1Q9Y222 760 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
PHGDH-212ENST00000641247 TP53BP1Q12888 1972 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-212ENST00000641247 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 BLACEA4D250 179 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 EME2A4GXA9 379 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ACSL4O60488 711 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 MAGEC1O60732 1142 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 GJB6O95452 261 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ADH1BP00325 375 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 IGLV3-27P01718 113 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ASLP04424 464 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 RPN1P04843 607 aaKnown RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ITGB2P05107 769 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 HGFP14210 728 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ZNF165P49910 485 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 AP3M2P53677 418 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 FOXK1P85037 733 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ZNF177Q13360 481 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 DPCR1Q3MIW9 517 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 FAM26FQ5R3K3 315 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 TPRG1LQ5T0D9 272 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 CNNM4Q6P4Q7 775 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 GCNT7Q6ZNI0 430 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 STXBP4Q6ZWJ1 553 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ARHGAP18Q8N392 663 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 ARL14Q8N4G2 192 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 SLC4A11Q8NBS3 891 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 WDR36Q8NI36 951 aaKnown RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 TATDN2Q93075 761 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 BMFQ96LC9 184 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 HEXIM2Q96MH2 286 aaKnown RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 CALN1Q9BXU9 219 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 BLZF1Q9H2G9 400 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 SLC39A2Q9NP94 309 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 RMND1Q9NWS8 449 aa10.01□□□□□ -0.81
PHGDH-212ENST00000641247 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 XPO7Q9UIA9 1087 aaKnown RBP10.01□□□□□ -0.81
PHGDH-212ENST00000641247 RNGTTO60942 597 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 LATS1O95835 1130 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 SRPRAP08240 638 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 ITGA2BP08514 1039 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 P4HA1P13674 534 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 BMP6P22004 513 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 RAD23BP54727 409 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 ECT2LQ008S8 904 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 SERINC3Q13530 473 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 KNOP1Q1ED39 458 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 CT47A1Q5JQC4 288 aaPredicted RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 ISM2Q6H9L7 571 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 OR6B2Q6IFH4 312 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 RBM44Q6ZP01 1051 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 C11orf57Q6ZUT1 292 aaPredicted RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 B3GNT8Q7Z7M8 397 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 VASH2Q86V25 355 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 MLKLQ8NB16 471 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 TAS1R2Q8TE23 839 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 TAF4BQ92750 862 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 BPIFA3Q9BQP9 254 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 SLC25A18Q9H1K4 315 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 KDM4CQ9H3R0 1056 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 CBX8Q9HC52 389 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 PPM1HQ9ULR3 514 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 TPX2Q9ULW0 747 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 ZFR2Q9UPR6 939 aaKnown RBP10□□□□□ -0.81
PHGDH-212ENST00000641247 PAXBP1Q9Y5B6 917 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 AHCTF1Q8WYP5 2266 aa10□□□□□ -0.81
PHGDH-212ENST00000641247 A0A1W2PQU0 124 aa9.99□□□□□ -0.81
PHGDH-212ENST00000641247 AGRPO00253 132 aa9.99□□□□□ -0.81
PHGDH-212ENST00000641247 SPINT1O43278 529 aa9.99□□□□□ -0.81
PHGDH-212ENST00000641247 KLRC4O43908 158 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms