RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 KCNMB4Q86W47 210 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 SCN4BQ8IWT1 228 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ATPAF2Q8N5M1 289 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ATXN7L3BQ96GX2 97 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ZNF419Q96HQ0 510 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-211ENST00000641213 WWP1Q9H0M0 922 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 CATSPERBQ9H7T0 1116 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-211ENST00000641213 A0A1W2PQH9 124 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ITM2AO43736 263 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 MAFKO60675 156 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 LYPLA1O75608 230 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-211ENST00000641213 CALB2P22676 271 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 NMBRP28336 390 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 SERPINB8P50452 374 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 LINC00523Q86TU6 105 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 LZTR1Q8N653 840 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 SPATA22Q8NHS9 363 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 IL12RB2Q99665 862 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 BTBD10Q9BSF8 475 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 CADM1Q9BY67 442 aaKnown RBP17.4■□□□□ 0.38
PHGDH-211ENST00000641213 SLC39A8Q9C0K1 460 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ZCWPW1Q9H0M4 648 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 C20orf96Q9NUD7 363 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-211ENST00000641213 NDFIP2Q9NV92 336 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ZNF358Q9NW07 568 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ABI2Q9NYB9 513 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-211ENST00000641213 ARMCX1Q9P291 453 aa17.4■□□□□ 0.38
PHGDH-211ENST00000641213 GREB1Q4ZG55 1949 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 E2F8A0AVK6 867 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 KCNU1A8MYU2 1149 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 AP3B1O00203 1094 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 CABYRO75952 493 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 OAZ2O95190 189 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 TRAF7Q6Q0C0 670 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 SLC24A5Q71RS6 500 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 RNF180Q86T96 592 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 C10orf107Q8IVU9 208 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 LINC01599Q8WXQ3 324 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 ZNF778Q96MU6 729 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 MCMBPQ9BTE3 642 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 OSER1Q9NX31 292 aa17.39■□□□□ 0.37
PHGDH-211ENST00000641213 AAR2Q9Y312 384 aaKnown RBP17.39■□□□□ 0.37
PHGDH-211ENST00000641213 ALDH1A1P00352 501 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 DNAJB2P25686 324 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 SLC1A6P48664 564 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 NOMO2Q5JPE7 1267 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 PLD6Q8N2A8 252 aaKnown RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 FCRL5Q96RD9 977 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 KIFC1Q9BW19 673 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 TRPV6Q9H1D0 765 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 EBF2Q9HAK2 575 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 GLOD4Q9HC38 313 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 IARS2Q9NSE4 1012 aaKnown RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 COPG2Q9UBF2 871 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 MRPL42Q9Y6G3 142 aaKnown RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 VGLL3A8MV65 326 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 CAPN14A8MX76 684 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 TMEM189-UBE2V1I3L0A0 370 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 MATN3O15232 486 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 MOCS2O96007 188 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 SERPINE1P05121 402 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 ESRRAP11474 423 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 ABCG1P45844 678 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 TUBP50607 506 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 CSE1LP55060 971 aaKnown RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 MPP3Q13368 585 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 SDHAF4Q5VUM1 108 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 RINLQ6ZS11 566 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 DCP1BQ8IZD4 617 aaKnown RBP17.38■□□□□ 0.37
PHGDH-211ENST00000641213 TBL1YQ9BQ87 522 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 CAB39LQ9H9S4 337 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 HS3ST4Q9Y661 456 aa17.38■□□□□ 0.37
PHGDH-211ENST00000641213 E9PAM4 449 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 MPOP05164 745 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 GM2AP17900 193 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 OR1G1P47890 313 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 FAM189BP81408 668 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 CCDC153Q494R4 210 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 AFMIDQ63HM1 303 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 ATG14Q6ZNE5 492 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 C14orf80Q86SX3 495 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 PIWIL2Q8TC59 973 aaKnown RBP17.37■□□□□ 0.37
PHGDH-211ENST00000641213 EBF4Q9BQW3 602 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 TBC1D13Q9NVG8 400 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 MPP6Q9NZW5 540 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 DNAJB4Q9UDY4 337 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 SCML2Q9UQR0 700 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 DNAJC16Q9Y2G8 782 aa17.37■□□□□ 0.37
PHGDH-211ENST00000641213 A0A096LPK6 155 aa17.36■□□□□ 0.37
PHGDH-211ENST00000641213 CCDC78A2IDD5 438 aa17.36■□□□□ 0.37
PHGDH-211ENST00000641213 GOLGA8TH3BQL2 631 aa17.36■□□□□ 0.37
PHGDH-211ENST00000641213 GSC2O15499 205 aa17.36■□□□□ 0.37
PHGDH-211ENST00000641213 TIMM44O43615 452 aa17.36■□□□□ 0.37
PHGDH-211ENST00000641213 ANXA9O76027 345 aa17.36■□□□□ 0.37
PHGDH-211ENST00000641213 ANP32DO95626 131 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms