RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 INVSQ9Y283 1065 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 NOX1Q9Y5S8 564 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 AFDNP55196 1824 aaKnown RBP5.11□□□□□ -1.59
SCN1A-218ENST00000640036 A8MX80 341 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 NPC1O15118 1278 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 GJB5O95377 273 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 SEMG2Q02383 582 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 MYBPC2Q14324 1141 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 PRSS55Q6UWB4 352 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-218ENST00000640036 BBS7Q8IWZ6 715 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 PDCD10Q9BUL8 212 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 RAB6BQ9NRW1 208 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 L3MBTL1Q9Y468 752 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 OR10H1Q9Y4A9 318 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 FFAR2O15552 330 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 ZNF544Q6NX49 715 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 ENPP7Q6UWV6 458 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 LRRC8CQ8TDW0 803 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 HSFY1Q96LI6 401 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 FBRSQ9HAH7 460 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 KLQ9UEF7 1012 aa5.11□□□□□ -1.59
SCN1A-218ENST00000640036 DYTNA2CJ06 578 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 B4DGG1 531 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ENPP3O14638 875 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PEX14O75381 377 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 KLF8O95600 359 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GSPT1P15170 499 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PPP2R1BP30154 601 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 STIP1P31948 543 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SCNN1AP37088 669 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CCR4P51679 360 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 FOXC1Q12948 553 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PDK2Q15119 407 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SGO1Q5FBB7 561 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 COL13A1Q5TAT6 717 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 DAGLBQ8NCG7 672 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 AGPAT1Q99943 283 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GPR174Q9BXC1 333 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GOLPH3Q9H4A6 298 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GDE1Q9NZC3 331 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ANGPTL2Q9UKU9 493 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 C10orf71Q711Q0 1435 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PP2D1A8MPX8 630 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 F8W810 466 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SLC25A12O75746 678 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 POP4O95707 220 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GLP2RO95838 553 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SESN3P58005 492 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TRIP10Q15642 601 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ANO5Q75V66 913 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 EFL1Q7Z2Z2 1120 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 LCA5Q86VQ0 697 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TMEM156Q8N614 296 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MAPK15Q8TD08 544 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MR1Q95460 341 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CNDP1Q96KN2 507 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 DUSP23Q9BVJ7 150 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TKTL2Q9H0I9 626 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 C20orf96Q9NUD7 363 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ANAPC2Q9UJX6 822 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ASF1AQ9Y294 204 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SCN8AQ9UQD0 1980 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 EXOC1LA0A1B0GW35 172 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 HEPACAM2A8MVW5 462 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MYO1GB0I1T2 1018 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CHRNA1P02708 482 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CPA2P48052 419 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ABCE1P61221 599 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ZDHHC20Q5W0Z9 365 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ACAD11Q709F0 780 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 HORMAD2Q8N7B1 307 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 FEZF2Q8TBJ5 459 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ELMO2Q96JJ3 720 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TBCDQ9BTW9 1192 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TRIM9Q9C026 710 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PAK5Q9P286 719 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 RNF14Q9UBS8 474 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TRIM33Q9UPN9 1127 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 OAS3Q9Y6K5 1087 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 A0A0U1RQF3 1178 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CCDC130P13994 396 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CDH2P19022 906 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MMP13P45452 471 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GPS1Q13098 491 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MORF4L2Q15014 288 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 RASIP1Q5U651 963 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 BTNL9Q6UXG8 535 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 DGLUCYQ7Z3D6 616 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GRAMD1CQ8IYS0 662 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CMKLR1Q99788 373 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 EPS8L2Q9H6S3 715 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CNGB3Q9NQW8 809 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ZDHHC7Q9NXF8 308 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 KLHL28Q9NXS3 571 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MYH8P13535 1937 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CCDC88AQ3V6T2 1871 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 DFNA5O60443 496 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CNTN5O94779 1100 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ADH1BP00325 375 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms