RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 VPS39Q96JC1 886 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 POLIQ9UNA4 740 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 IFT52Q9Y366 437 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PNMA8CA0A1B0GUJ8 204 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 RNASEH2AO75792 299 aaKnown RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 SMIM18P0DKX4 95 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 CNTFP26441 200 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 RXRBP28702 533 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 BLVRAP53004 296 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 GTF2H3Q13889 308 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 TYSND1Q2T9J0 566 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 DCAKDQ8WVC6 231 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 SLCO2A1Q92959 643 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 NXNL1Q96CM4 212 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 CGREF1Q99674 301 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ZSCAN5AQ9BUG6 496 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ACAT2Q9BWD1 397 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 EML4Q9HC35 981 aaKnown RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PTPRHQ9HD43 1115 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF224Q9NZL3 707 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PADI4Q9UM07 663 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 WDR27A2RRH5 827 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 KCNU1A8MYU2 1149 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SLCO1B7G3V0H7 640 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 TRDMT1O14717 391 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ILF2Q12905 390 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 NFYCQ13952 458 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 GRM2Q14416 872 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ATAD3BQ5T9A4 648 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 DENND5AQ6IQ26 1287 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SPPL2CQ8IUH8 684 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 RASSF5Q8WWW0 418 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF347Q96SE7 839 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 MSTO1Q9BUK6 570 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CDH19Q9H159 772 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SLC38A10Q9HBR0 1119 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SRP68Q9UHB9 627 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CCDC182A6NF36 153 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 HTRA2O43464 458 aaPredicted RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 HS6ST1O60243 411 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CPNE3O75131 537 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 TOP3BO95985 862 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ITGAVP06756 1048 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 FDX1P10109 184 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SOX6P35712 828 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 TNFAIP8L3Q5GJ75 292 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 TMEM198Q66K66 360 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 BORAQ6PGQ7 559 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CDHR3Q6ZTQ4 885 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ANKRD13AQ8IZ07 590 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 AMER2Q8N7J2 671 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 C7orf31Q8N865 590 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 MINDY2Q8NBR6 621 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 GRIN3AQ8TCU5 1115 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 HESX1Q9UBX0 185 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CCNL1Q9UK58 526 aaPredicted RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 RAD54BQ9Y620 910 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 PSAPP07602 524 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 FGFR2P21802 821 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 MPSTP25325 297 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF543Q08ER8 600 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 NFATC3Q12968 1075 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 MAMLD1Q13495 774 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 PHKG1Q16816 387 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 EFL1Q7Z2Z2 1120 aaKnown RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CMC1Q7Z7K0 106 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 KBTBD6Q86V97 674 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF781Q8N8C0 355 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SLC35B4Q969S0 331 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 MKL1Q969V6 931 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 FAM84AQ96KN4 292 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 HGH1Q9BTY7 390 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 KCNK13Q9HB14 408 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 NMRAL1Q9HBL8 299 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 XPNPEP3Q9NQH7 507 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 CCDC177Q9NQR7 707 aaPredicted RBP11.28□□□□□ -0.6
SPIN3-230ENST00000639888 GPATCH2LQ9NWQ4 482 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 SLIT3O75094 1523 aa11.28□□□□□ -0.6
SPIN3-230ENST00000639888 TNFRSF10AO00220 468 aa11.27□□□□□ -0.6
SPIN3-230ENST00000639888 BTN3A3O00478 584 aa11.27□□□□□ -0.6
SPIN3-230ENST00000639888 CRHR1P34998 444 aa11.27□□□□□ -0.6
SPIN3-230ENST00000639888 CAPRIN1Q14444 709 aaKnown RBP11.27□□□□□ -0.6
SPIN3-230ENST00000639888 PPM1JQ5JR12 505 aa11.27□□□□□ -0.6
SPIN3-230ENST00000639888 KLHL17Q6TDP4 642 aa11.27□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF420Q8TAQ5 688 aaPredicted RBP11.27□□□□□ -0.6
SPIN3-230ENST00000639888 TFB1MQ8WVM0 346 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms