RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 FSBPO95073 299 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 CPSF4O95639 269 aaKnown RBP14.58□□□□□ -0.08
SCARB2-208ENST00000638372 RPL9P32969 192 aaKnown RBP14.58□□□□□ -0.08
SCARB2-208ENST00000638372 BCL2L1Q07817 233 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 CDC16Q13042 620 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 KPNB1Q14974 876 aaKnown RBP14.58□□□□□ -0.08
SCARB2-208ENST00000638372 SLC10A6Q3KNW5 377 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 SDE2Q6IQ49 451 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 KLHL5Q96PQ7 755 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 C12orf65Q9H3J6 166 aaKnown RBP14.58□□□□□ -0.08
SCARB2-208ENST00000638372 KCNK4Q9NYG8 393 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 ZMYM5Q9UJ78 669 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 PTCH2Q9Y6C5 1203 aa14.58□□□□□ -0.08
SCARB2-208ENST00000638372 MRASO14807 208 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SYNCRIPO60506 623 aaKnown RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 RAP1GDS1P52306 607 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 LRRC15Q8TF66 581 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 KCTD4Q8WVF5 259 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 MARK4Q96L34 752 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SPATA16Q9BXB7 569 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 DHX15O43143 795 aaKnown RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ELF3P78545 371 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 DENND1CQ8IV53 801 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 TOP6BLQ8N6T0 577 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ATAD1Q8NBU5 361 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ACE2Q9BYF1 805 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 DOLKQ9UPQ8 538 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 GIT1Q9Y2X7 761 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SF3B1O75533 1304 aaKnown RBP eCLIP14.57□□□□□ -0.084e-6■■■■■ 139.6
SCARB2-208ENST00000638372 MGAT4DA6NG13 374 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 GLTPD2A6NH11 291 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 INPP4BO15327 924 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 UNC5CO95185 931 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 CYP1A1P04798 512 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ATP6V1B2P21281 511 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 FECHP22830 423 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 RPL14P50914 215 aaKnown RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SLC25A3Q00325 362 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 MBTD1Q05BQ5 628 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 CCDC85BQ15834 202 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 HECTD3Q5T447 861 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ARMC12Q5T9G4 340 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 CCDC81Q6ZN84 652 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 PCDH20Q8N6Y1 951 aaKnown RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ZSCAN18Q8TBC5 510 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 ZYG11BQ9C0D3 744 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 EXOSC4Q9NPD3 245 aaKnown RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SEMA4BQ9NPR2 832 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SAR1AQ9NR31 198 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 VTI1BQ9UEU0 232 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 CROTQ9UKG9 612 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 SAC3D1A6NKF1 404 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 F8W810 466 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 KPNA3O00505 521 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 PSMC3P17980 439 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 HDCP19113 662 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 TUSC3Q13454 348 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 CAMK2GQ13555 558 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-208ENST00000638372 C11orf74Q86VG3 221 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 FBXO5Q9UKT4 447 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 COQ4Q9Y3A0 265 aa14.57□□□□□ -0.08
SCARB2-208ENST00000638372 TLR5O60602 858 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 FAM155BO75949 473 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 ZNF682O95780 498 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 ALOX15P16050 662 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-208ENST00000638372 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 WASHC2DQ5SRD0 308 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 CERCAMQ5T4B2 595 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 STRADAQ7RTN6 431 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 TMEM192Q8IY95 271 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 CPT1BQ92523 772 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 RBPJLQ9UBG7 517 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 HNRNPCL2B2RXH8 293 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 CABYRO75952 493 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 FAM126BQ8IXS8 530 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 DPEP3Q9H4B8 488 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 NDUFAF1Q9Y375 327 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 ADGRA3Q8IWK6 1321 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 URB1O60287 2271 aaKnown RBP14.56□□□□□ -0.08
SCARB2-208ENST00000638372 DAB1O75553 588 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 SMNDC1O75940 238 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCARB2-208ENST00000638372 KRT6AP02538 564 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 KRT6BP04259 564 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 SMPD1P17405 629 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 TFEBP19484 476 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 SP100P23497 879 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-208ENST00000638372 KRT6CP48668 564 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 SLC34A1Q06495 639 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 NAB1Q13506 487 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 PWP1Q13610 501 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 TBCELQ5QJ74 424 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 OTUD3Q5T2D3 398 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-208ENST00000638372 ISLR2Q6UXK2 745 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 SYTL1Q8IYJ3 562 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 PYDC1Q8WXC3 89 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 ZNF516Q92618 1163 aa14.56□□□□□ -0.08
SCARB2-208ENST00000638372 NKD2Q969F2 451 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-208ENST00000638372 MAML3Q96JK9 1138 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms