RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HNRNPABQ99729 332 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 DRC3Q9H069 523 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZCWPW1Q9H0M4 648 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 NDUFA13Q9P0J0 144 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 PPP1R1BQ9UD71 204 aaPredicted RBP20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ANKRD6Q9Y2G4 727 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 MTSS1O43312 755 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ERCC2P18074 760 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 CYP2B6P20813 491 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ADSLP30566 484 aaPredicted RBP20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 NPY2RP49146 381 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 PPIDQ08752 370 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 NME3Q13232 169 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZNF618Q5T7W0 954 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 SEL1L3Q68CR1 1132 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 GPC2Q8N158 579 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 B4GALNT2Q8NHY0 566 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 MFSD3Q96ES6 412 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ACE2Q9BYF1 805 aaPredicted RBP20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 BRD8Q9H0E9 1235 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 GBA3Q9H227 469 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 ADAMTS10Q9H324 1103 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 BCAP29Q9UHQ4 241 aa20.5■□□□□ 0.87
SYNGAP1-227ENST00000638142 TXNDC9O14530 226 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 AIM2O14862 343 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 GRIA2P42262 883 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 RPL14P50914 215 aaKnown RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 SNAPC2Q13487 334 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 LIPMQ5VYY2 423 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZFP1Q6P2D0 407 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZYG11AQ6WRX3 759 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 LCA5Q86VQ0 697 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 SNX32Q86XE0 403 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 MARVELD2Q8N4S9 558 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 CPSF7Q8N684 471 aaKnown RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 B3GALNT2Q8NCR0 500 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 SHCBP1Q8NEM2 672 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 AGR3Q8TD06 166 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 OPTNQ96CV9 577 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 NXF3Q9H4D5 531 aaKnown RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 C20orf96Q9NUD7 363 aaPredicted RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 PIGVQ9NUD9 493 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 KCNH4Q9UQ05 1017 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 DENRO43583 198 aaKnown RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 FBXO21O94952 628 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 MPSTP25325 297 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 ADRA1BP35368 520 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 TAF6P49848 677 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 CSRP3P50461 194 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 ANO4Q32M45 955 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 FBXL19Q6PCT2 694 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 BNC2Q6ZN30 1099 aaPredicted RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 DSELQ8IZU8 1212 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 KCTD13Q8WZ19 329 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 NTAN1Q96AB6 310 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 IL22Q9GZX6 179 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 Q9H521 79 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 NSMCE4AQ9NXX6 385 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 TRHDEQ9UKU6 1024 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 GINS2Q9Y248 185 aa20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZNF638Q14966 1978 aaKnown RBP20.49■□□□□ 0.87
SYNGAP1-227ENST00000638142 C15orf38-AP3S2A0A0A6YYH1 394 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 GOLGA8QA0A0J9YX86 632 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 RBM47A0AV96 593 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 GOLGA8OA6NCC3 632 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 GOLGA8NF8WBI6 632 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 SLCO1B7G3V0H7 640 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 CABYRO75952 493 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 CHRNGP07510 517 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 NPR3P17342 541 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 LSM12Q3MHD2 195 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 RARS2Q5T160 578 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 CERCAMQ5T4B2 595 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 SYPL2Q5VXT5 272 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 ITPRIPL1Q6GPH6 555 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 TMC7Q7Z402 723 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 ARPINQ7Z6K5 226 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 DCUN1D1Q96GG9 259 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 TSNARE1Q96NA8 513 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 GPR22Q99680 433 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 WDR55Q9H6Y2 383 aaPredicted RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 LRRC4Q9HBW1 653 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 VTI1BQ9UEU0 232 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 CAPN8A6NHC0 703 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 ZBTB24O43167 697 aaPredicted RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 XPOTO43592 962 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 ATP9BO43861 1147 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 PPARGP37231 505 aaPredicted RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 ABCG1P45844 678 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 HCAR3P49019 387 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 SCAPQ12770 1279 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 PRKAA1Q13131 559 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 SEMA3BQ13214 749 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 CYLC2Q14093 348 aaPredicted RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 SV2CQ496J9 727 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 INTS6LQ5JSJ4 861 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 SIX6OS1Q8N1H7 587 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 CATSPER1Q8NEC5 780 aa20.48■□□□□ 0.87
SYNGAP1-227ENST00000638142 GCNAQ96QF7 691 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms