RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SLC8A1P32418 973 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 GMPRP36959 345 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 LIMK2P53671 638 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 NFE2Q16621 373 aaPredicted RBP21.92■■□□□ 1.1
CLN6-224ENST00000638076 DBN1Q16643 649 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 FSTL4Q6MZW2 842 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 C14orf80Q86SX3 495 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 MON1AQ86VX9 555 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 TBC1D10AQ9BXI6 508 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 THAP1Q9NVV9 213 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 MPP6Q9NZW5 540 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 LNPEPQ9UIQ6 1025 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 ADAM28Q9UKQ2 775 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 SCML2Q9UQR0 700 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 E2F8A0AVK6 867 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 TRAFD1O14545 582 aaPredicted RBP21.92■■□□□ 1.1
CLN6-224ENST00000638076 PSMD3O43242 534 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 NMBRP28336 390 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 NOGQ13253 232 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 INSCQ1MX18 579 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 HSF5Q4G112 596 aaPredicted RBP21.92■■□□□ 1.1
CLN6-224ENST00000638076 MBLAC2Q68D91 279 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 TTC7BQ86TV6 843 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 ALYREFQ86V81 257 aaKnown RBP21.92■■□□□ 1.1
CLN6-224ENST00000638076 CEP57Q86XR8 500 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 KLHDC8BQ8IXV7 354 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 CD99L2Q8TCZ2 262 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 FUBP3Q96I24 572 aaKnown RBP eCLIP21.92■■□□□ 1.1
CLN6-224ENST00000638076 IL12RB2Q99665 862 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 ARL8BQ9NVJ2 186 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 TMEM216Q9P0N5 145 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 A0A1W2PQ45 241 aaPredicted RBP21.91■■□□□ 1.1
CLN6-224ENST00000638076 A0A1W2PQY0 241 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 AP3B1O00203 1094 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 MATN3O15232 486 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 PRKCGP05129 697 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 PTPN4P29074 926 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 VARS2Q5ST30 1063 aaKnown RBP21.91■■□□□ 1.1
CLN6-224ENST00000638076 ISL2Q96A47 359 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 ZNF778Q96MU6 729 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 FCRL5Q96RD9 977 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 IARS2Q9NSE4 1012 aaKnown RBP21.91■■□□□ 1.1
CLN6-224ENST00000638076 MYO16Q9Y6X6 1858 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 CCDC78A2IDD5 438 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 FGF3P11487 239 aaPredicted RBP21.91■■□□□ 1.1
CLN6-224ENST00000638076 MAGEA12P43365 314 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 SERPINB8P50452 374 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 USP46P62068 366 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 PCLAFQ15004 111 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 RTL3Q8N8U3 475 aaKnown RBP21.91■■□□□ 1.1
CLN6-224ENST00000638076 RAET1EQ8TD07 263 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 AGAP11Q8TF27 550 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 C8orf48Q96LL4 319 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 TBL1YQ9BQ87 522 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 FBXO44Q9H4M3 255 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 GLOD4Q9HC38 313 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 STARD7Q9NQZ5 370 aa21.91■■□□□ 1.1
CLN6-224ENST00000638076 HBS1LQ9Y450 684 aaKnown RBP21.91■■□□□ 1.1
CLN6-224ENST00000638076 GOLGA8TH3BQL2 631 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 FCHO1O14526 889 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 HNRNPCL1O60812 293 aaKnown RBP21.9■■□□□ 1.1
CLN6-224ENST00000638076 PROCP04070 461 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 ABCG1P45844 678 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 MLLT6P55198 1093 aaPredicted RBP21.9■■□□□ 1.1
CLN6-224ENST00000638076 LONP2Q86WA8 852 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 IPMKQ8NFU5 416 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 PTCD3Q96EY7 689 aaKnown RBP21.9■■□□□ 1.1
CLN6-224ENST00000638076 TUBB6Q9BUF5 446 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 NMUR2Q9GZQ4 415 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 ZNF358Q9NW07 568 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 TLR6Q9Y2C9 796 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 PCDHB5Q9Y5E4 795 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 DNAJB2P25686 324 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 HOXD10P28358 340 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 AQP5P55064 265 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 MPP3Q13368 585 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 E2F5Q15329 346 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 PIK3R6Q5UE93 754 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 TTC9BQ8N6N2 239 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 NSL1Q96IY1 281 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 KIFC1Q9BW19 673 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 CAB39LQ9H9S4 337 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 GMIPQ9P107 970 aa21.9■■□□□ 1.1
CLN6-224ENST00000638076 ITM2AO43736 263 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 ANXA9O76027 345 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 PAPOLAP51003 745 aaKnown RBP21.89■■□□□ 1.1
CLN6-224ENST00000638076 CTXN3Q4LDR2 81 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 AFMIDQ63HM1 303 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 C10orf107Q8IVU9 208 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 ATAD1Q8NBU5 361 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 GPR152Q8TDT2 470 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 WWP1Q9H0M0 922 aa21.89■■□□□ 1.1
CLN6-224ENST00000638076 SYN3O14994 580 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 LYPLA1O75608 230 aaPredicted RBP21.89■■□□□ 1.09
CLN6-224ENST00000638076 HLA-DQB2P05538 268 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 NRG1Q02297 640 aaPredicted RBP21.89■■□□□ 1.09
CLN6-224ENST00000638076 TIGD7Q6NT04 549 aaPredicted RBP21.89■■□□□ 1.09
CLN6-224ENST00000638076 PLD6Q8N2A8 252 aaKnown RBP21.89■■□□□ 1.09
CLN6-224ENST00000638076 SLC43A3Q8NBI5 491 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 SLC39A13Q96H72 371 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms