RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZNF165P49910 485 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 OXCT1P55809 520 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 MTA1Q13330 715 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 ELAVL3Q14576 367 aaKnown RBP18.18■□□□□ 0.5
PNKP-230ENST00000638016 IQCB1Q15051 598 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 KIAA0895LQ68EN5 471 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 USP30Q70CQ3 517 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SH2D3CQ8N5H7 860 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 FAM172AQ8WUF8 416 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 C1orf74Q96LT6 269 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 HAPLN3Q96S86 360 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 OMDQ99983 421 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SYT11Q9BT88 431 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 NAT10Q9H0A0 1025 aaKnown RBP18.18■□□□□ 0.5
PNKP-230ENST00000638016 TM9SF3Q9HD45 589 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 DNAAF2Q9NVR5 837 aaKnown RBP18.18■□□□□ 0.5
PNKP-230ENST00000638016 NEU3Q9UQ49 428 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 NCKAP1Q9Y2A7 1128 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 FNDC3AQ9Y2H6 1198 aaKnown RBP18.18■□□□□ 0.5
PNKP-230ENST00000638016 LRRC53A6NM62 1247 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 KCNK3O14649 394 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 WNT9AO14904 365 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 SH3BP5O60239 455 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 CTSLP07711 333 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 KRT3P12035 628 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 OR1E1P30953 314 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 ADPRHP54922 357 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 PPP2CBP62714 309 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 PPP2CAP67775 309 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 FOXC1Q12948 553 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 KIF19Q2TAC6 998 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 WDR59Q6PJI9 974 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 LRRC31Q6UY01 552 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 IRF2BP2Q7Z5L9 587 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 DRC7Q8IY82 874 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 SLC6A18Q96N87 628 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 SELENOOQ9BVL4 669 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 PCED1AQ9H1Q7 454 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 GAREM1Q9H706 876 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 PAXBP1Q9Y5B6 917 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 CHD5Q8TDI0 1954 aa18.17■□□□□ 0.5
PNKP-230ENST00000638016 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 CCP110O43303 1012 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 ATMINO43313 823 aaPredicted RBP18.16■□□□□ 0.5
PNKP-230ENST00000638016 RTN2O75298 545 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 CEACAM1P13688 526 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 GPD1P21695 349 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 C5AR1P21730 350 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 ADRA1BP35368 520 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 ACVRL1P37023 503 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 PTPN9P43378 593 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 GSCP56915 257 aaPredicted RBP18.16■□□□□ 0.5
PNKP-230ENST00000638016 RPL7AP62424 266 aaKnown RBP18.16■□□□□ 0.5
PNKP-230ENST00000638016 OGDHQ02218 1023 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.16■□□□□ 0.5
PNKP-230ENST00000638016 PYROXD2Q8N2H3 581 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 DCAF4L2Q8NA75 395 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 ATP11CQ8NB49 1132 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 CHST14Q8NCH0 376 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 C3orf20Q8ND61 904 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 OR14C36Q8NHC7 312 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 OR8D1Q8WZ84 308 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 MCEEQ96PE7 176 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 SPON2Q9BUD6 331 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 ZYG11BQ9C0D3 744 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 TNKS2Q9H2K2 1166 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 ADAMTS1Q9UHI8 967 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 SCML1Q9UN30 329 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 HS3ST2Q9Y278 367 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 SNX11Q9Y5W9 270 aa18.16■□□□□ 0.5
PNKP-230ENST00000638016 C10orf142B7Z368 130 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 CBX4O00257 560 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 ADH1BP00325 375 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 CALB1P05937 261 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 FERP16591 822 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 GOT1P17174 413 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 CD27P26842 260 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 VASPP50552 380 aaPredicted RBP18.15■□□□□ 0.5
PNKP-230ENST00000638016 HLA-BQ31612 363 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 STRADAQ7RTN6 431 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 SETD3Q86TU7 594 aaPredicted RBP18.15■□□□□ 0.5
PNKP-230ENST00000638016 LUZP1Q86V48 1076 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 PIP4K2CQ8TBX8 421 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 CENPIQ92674 756 aaPredicted RBP18.15■□□□□ 0.5
PNKP-230ENST00000638016 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 OR12D3Q9UGF7 316 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 FZD4Q9ULV1 537 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 EPG5Q9HCE0 2579 aa18.15■□□□□ 0.5
PNKP-230ENST00000638016 CEP295Q9C0D2 2601 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 A0A1B0GTH6 734 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 SMTNL1A8MU46 457 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 ZMPSTE24O75844 475 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 LRIG2O94898 1065 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 WNT1P04628 370 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 AFF3P51826 1226 aaKnown RBP18.14■□□□□ 0.49
PNKP-230ENST00000638016 KRT83P78385 493 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 SIM1P81133 766 aaPredicted RBP18.14■□□□□ 0.49
PNKP-230ENST00000638016 ARF5P84085 180 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms