RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 LCA10Q71F78 164 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 KIAA1328Q86T90 577 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NLRP10Q86W26 655 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PARGQ86W56 976 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TRIM50Q86XT4 487 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 KMT5CQ86Y97 462 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 BRSK2Q8IWQ3 736 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 AMOTL1Q8IY63 956 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CADM3Q8N126 398 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 Q8N1Y9 231 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SLC25A45Q8N413 288 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MYCT1Q8N699 235 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF433Q8N7K0 673 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 GSTCDQ8NEC7 633 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 KLHDC9Q8NEP7 349 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SLC24A4Q8NFF2 622 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 OR2L5Q8NG80 312 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CEP76Q8TAP6 659 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF596Q8TC21 504 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MIPOL1Q8TD10 442 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 VPS33AQ96AX1 596 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TRMT61AQ96FX7 289 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CCDC17Q96LX7 622 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MUS81Q96NY9 551 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TRAPPC9Q96Q05 1148 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PITX2Q99697 317 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MAPKAP1Q9BPZ7 522 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF251Q9BRH9 671 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 FSD1LQ9BXM9 530 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TINAGL1Q9GZM7 467 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 GPR88Q9GZN0 384 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SHARPINQ9H0F6 387 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 RACGAP1Q9H0H5 632 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 UPF3AQ9H1J1 476 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TASP1Q9H6P5 420 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 COG4Q9H9E3 785 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 COPRSQ9NQ92 184 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ARHGEF4Q9NR80 690 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 DUSP22Q9NRW4 184 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PLCXD1Q9NUJ7 323 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ABCF3Q9NUQ8 709 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ATAD3AQ9NVI7 634 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NUDT4Q9NZJ9 180 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ZKSCAN7Q9P0L1 754 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CPNE7Q9UBL6 633 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TBC1D29Q9UFV1 150 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 KLHL3Q9UH77 587 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MAGEL2Q9UJ55 1249 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TIMELESSQ9UNS1 1208 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CYP8B1Q9UNU6 501 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TBC1D2BQ9UPU7 963 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 FOXJ3Q9UPW0 622 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SF3B6Q9Y3B4 125 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SHROOM3Q8TF72 1996 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NCOR1O75376 2440 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SVEP1Q4LDE5 3571 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PRAMEF33A0A0G2JMD5 474 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 A0A1W2PQ72 361 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 A0A1W2PS29 197 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FAM149AA5PLN7 773 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FAM90A20PA6NIJ5 464 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 KPNA7A9QM74 516 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 VWA5AO00534 786 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MSI1O43347 362 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 LIASO43766 372 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MARCH6O60337 910 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PRAMEF10O60809 474 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DTNBO60941 627 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FKBP6O75344 327 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PAGE1O75459 146 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SERPINI2O75830 405 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PDE8BO95263 885 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 LYPD3O95274 346 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 IFNA2P01563 188 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 IGLV1-47P01700 117 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TFRCP02786 760 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CYP21A2P08686 494 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ODC1P11926 461 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FCGR2AP12318 317 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CEACAM1P13688 526 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ARSBP15848 533 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GPX3P22352 226 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GCSHP23434 173 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 NFKBIAP25963 317 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MC4RP32245 332 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CPOXP36551 454 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PTPN9P43378 593 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MAP2K4P45985 399 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GTF2A2P52657 109 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DVL1P1P54792 670 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 WNT3P56703 355 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SNRPD1P62314 119 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CACNG7P62955 275 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 RPP30P78346 268 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GPSM2P81274 684 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PPARDQ03181 441 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DNM1Q05193 864 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GAD2Q05329 585 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PDE4CQ08493 712 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms