RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SKIDA1Q1XH10 827 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 HORMAD1Q86X24 394 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 PTRH1Q86Y79 214 aaKnown RBP18.69■□□□□ 0.58
CLN6-212ENST00000636020 SCML4Q8N228 414 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 FBXO39Q8N4B4 442 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 FAM26EQ8N5C1 309 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 ZNF564Q8TBZ8 553 aaPredicted RBP18.69■□□□□ 0.58
CLN6-212ENST00000636020 KCNK4Q9NYG8 393 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 C1QTNF3-AMACRE9PGA6 284 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 CSF2P04141 144 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 LIPCP11150 499 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 NME1P15531 152 aaKnown RBP18.68■□□□□ 0.58
CLN6-212ENST00000636020 CASP1P29466 404 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 UGT1A5P35504 534 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 DAOAP59103 153 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 GOLGA7BQ2TAP0 167 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 DEFB133Q30KQ1 61 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 PIP5KL1Q5T9C9 394 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 OR6B2Q6IFH4 312 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 JAMLQ86YT9 394 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 FAM174AQ8TBP5 190 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 HTR3CQ8WXA8 447 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 FCRL2Q96LA5 508 aaPredicted RBP18.68■□□□□ 0.58
CLN6-212ENST00000636020 BMFQ96LC9 184 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 FUCA2Q9BTY2 467 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 CNGB3Q9NQW8 809 aa18.68■□□□□ 0.58
CLN6-212ENST00000636020 ANKRD17O75179 2603 aaKnown RBP18.68■□□□□ 0.58
CLN6-212ENST00000636020 BLACEA4D250 179 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 A6NNZ2 444 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 TPP1O14773 563 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 MCF2LO15068 1137 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 MUSKO15146 869 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 AQP9O43315 295 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 WT1P19544 449 aaPredicted RBP18.67■□□□□ 0.58
CLN6-212ENST00000636020 GCLMP48507 274 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 NUMBP49757 651 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 VASPP50552 380 aaPredicted RBP18.67■□□□□ 0.58
CLN6-212ENST00000636020 CYP4F2P78329 520 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 EIF3IQ13347 325 aaKnown RBP18.67■□□□□ 0.58
CLN6-212ENST00000636020 MORC3Q14149 939 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 SPIDRQ14159 915 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 RAB11FIP2Q7L804 512 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 SIX6OS1Q8N1H7 587 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 TTC39CQ8N584 583 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 DHX58Q96C10 678 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 ADNPQ9H2P0 1102 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 CISHQ9NSE2 258 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 KLF15Q9UIH9 416 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 TSPAN16Q9UKR8 245 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 ZFR2Q9UPR6 939 aaKnown RBP18.67■□□□□ 0.58
CLN6-212ENST00000636020 HS3ST3A1Q9Y663 406 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 ITPR2Q14571 2701 aa18.67■□□□□ 0.58
CLN6-212ENST00000636020 SPTY2D1-AS1A0A0U1RR47 76 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
CLN6-212ENST00000636020 H3BM21 787 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 NTN3O00634 580 aaPredicted RBP18.66■□□□□ 0.58
CLN6-212ENST00000636020 ALOX15BO15296 676 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 ATP9BO43861 1147 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 VAMP7P51809 220 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 SULT2A1Q06520 285 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 PPP3CAQ08209 521 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 BST2Q10589 180 aaKnown RBP18.66■□□□□ 0.58
CLN6-212ENST00000636020 SLC12A1Q13621 1099 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 MANEAQ5SRI9 462 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 HIST2H2BCQ6DN03 193 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 PTAR1Q7Z6K3 402 aaPredicted RBP18.66■□□□□ 0.58
CLN6-212ENST00000636020 B3GNT8Q7Z7M8 397 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 VASH2Q86V25 355 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 ZSCAN1Q8NBB4 408 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 KCTD13Q8WZ19 329 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 NAT6Q93015 286 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 FAXDC2Q96IV6 333 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 BOCQ9BWV1 1114 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 BLZF1Q9H2G9 400 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 PPP4R2Q9NY27 417 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 SEPT10Q9P0V9 454 aa18.66■□□□□ 0.58
CLN6-212ENST00000636020 PVALEFA0A1B0GWK0 134 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 NVLO15381 856 aaKnown RBP18.65■□□□□ 0.58
CLN6-212ENST00000636020 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
CLN6-212ENST00000636020 NR3C1P04150 777 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 CASRP41180 1078 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 RPIAP49247 311 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 PLK1P53350 603 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 CEP135Q66GS9 1140 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 PARGQ86W56 976 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 SLC35F3Q8IY50 421 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 IQUBQ8NA54 791 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 CCDC150Q8NCX0 1101 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 LMX1AQ8TE12 382 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 ERCC4Q92889 916 aaPredicted RBP18.65■□□□□ 0.58
CLN6-212ENST00000636020 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 IL12RB2Q99665 862 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 CCDC3Q9BQI4 270 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 KCTD10Q9H3F6 313 aa18.65■□□□□ 0.58
CLN6-212ENST00000636020 POM121BA6NF01 834 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 GABBR2O75899 941 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 TRIM49P0CI25 452 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 TRIM49CP0CI26 452 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms