RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NAB1Q13506 487 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 PPP2R5DQ14738 602 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 LRRC14Q15048 493 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 C6orf89Q6UWU4 347 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 DENND5BQ6ZUT9 1274 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 PID1Q7Z2X4 250 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 LRRC49Q8IUZ0 686 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 IGDCC3Q8IVU1 814 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 SCN4BQ8IWT1 228 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 IQCF2Q8IXL9 164 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 NUP93Q8N1F7 819 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 GSDMBQ8TAX9 411 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 DENND1AQ8TEH3 1009 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 HDAC11Q96DB2 347 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 ANAPC16Q96DE5 110 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 SIGLEC10Q96LC7 697 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 SERPINB11Q96P15 392 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 PPP1R2P1Q96PQ5 205 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 TMEM209Q96SK2 561 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 WDR83Q9BRX9 315 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 TMEM175Q9BSA9 504 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 MRPL9Q9BYD2 267 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 RHOBTB2Q9BYZ6 727 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 SMOC2Q9H3U7 446 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CATSPERBQ9H7T0 1116 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 ALG13Q9NP73 1137 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 DCAF16Q9NXF7 216 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 KLHL8Q9P2G9 620 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 ADAM28Q9UKQ2 775 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 ITM2BQ9Y287 266 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 MAD1L1Q9Y6D9 718 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 IRAK2O43187 625 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 AVILO75366 819 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 KRT38O76015 456 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 SUN1O94901 812 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 DKK1O94907 266 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 RTN3O95197 1032 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 RASGRP1O95267 797 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 SNRPAP09012 282 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 KRT4P19013 534 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CNTFP26441 200 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CD151P48509 253 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 GALNT2Q10471 571 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 MPP2Q14168 576 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 PRPSAP1Q14558 356 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 KBTBD12Q3ZCT8 623 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CTXN3Q4LDR2 81 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 VARS2Q5ST30 1063 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CHRDL2Q6WN34 429 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 RGS9BPQ6ZS82 235 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 OTOP3Q7RTS5 596 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 LILRB1Q8NHL6 650 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 GDAP1Q8TB36 358 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CDKL2Q92772 493 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 STAMBPL1Q96FJ0 436 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 TGS1Q96RS0 853 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 PAIP2Q9BPZ3 127 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 ELAC2Q9BQ52 826 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 ABI2Q9NYB9 513 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 CDV3Q9UKY7 258 aaKnown RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 PRG3Q9Y2Y8 225 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-230ENST00000634433 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 MFHAS1Q9Y4C4 1052 aa7.32□□□□□ -1.24
BRCA1-230ENST00000634433 FAM72CH0Y354 149 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 MYO1CO00159 1063 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 RTCAO00442 366 aaKnown RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TYROBPO43914 113 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 SPAG7O75391 227 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TNFRSF21O75509 655 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 FAM155BO75949 473 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PYGLP06737 847 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 NRG1Q02297 640 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PIN1Q13526 163 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 EIF4EBP2Q13542 120 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 FAM72AQ5TYM5 149 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 STEAP4Q687X5 459 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 FAM72DQ6L9T8 149 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 FAM72BQ86X60 149 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 CTAGE3PQ8IX95 158 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 ZNF567Q8N184 647 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 DBF4BQ8NFT6 615 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 SCAMP5Q8TAC9 235 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 LRRC8CQ8TDW0 803 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 C2orf15Q8WU43 125 aaKnown RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 ACTR5Q9H9F9 607 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TMPRSS4Q9NRS4 437 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 OLA1Q9NTK5 396 aaKnown RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 SCHIP1Q9P0W5 487 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 USP15Q9Y4E8 981 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TTLL3Q9Y4R7 772 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PCDHB9Q9Y5E1 797 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 A0A1W2PPM1 405 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 MAGEB16A2A368 324 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 SNX3O60493 162 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 LRIG2O94898 1065 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PGAM1P18669 254 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 CCNCP24863 283 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PTPN3P26045 913 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 GARSP41250 739 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms