RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PSD3Q9NYI0 1048 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PLA2G2EQ9NZK7 142 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 EXOC7Q9UPT5 735 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 JRKLQ9Y4A0 524 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ANK1P16157 1881 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CLDN5O00501 218 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 KAT7O95251 611 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 IL18RAPO95256 599 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 APODP05090 189 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CYP17A1P05093 508 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ENGP17813 658 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CASP5P51878 434 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF143P52747 638 aaPredicted RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 LIMK1P53667 647 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SMARCB1Q12824 385 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 TAF10Q12962 218 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CASP8Q14790 479 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SPA17Q15506 151 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 LY6G5CQ5SRR4 150 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 LYSMD4Q5XG99 296 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 BTBD8Q5XKL5 378 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 PMS2CLQ68D20 193 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SCARA5Q6ZMJ2 495 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 C4orf50Q6ZRC1 276 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 RRAGAQ7L523 313 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF720Q7Z2F6 126 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 FGD2Q7Z6J4 655 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 UBE3DQ7Z6J8 389 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MCATQ8IVS2 390 aaKnown RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CHPFQ8IZ52 775 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 OR5B17Q8NGF7 314 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SPATA18Q8TC71 538 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 C2orf15Q8WU43 125 aaKnown RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ACCSQ96QU6 501 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ACBD6Q9BR61 282 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MED10Q9BTT4 135 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SNX25Q9H3E2 840 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SLC32A1Q9H598 525 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MMRN2Q9H8L6 949 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 VIPAS39Q9H9C1 493 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 TRAF3IP3Q9Y228 551 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 KALRNO60229 2985 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MACROD2A1Z1Q3 448 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CDX4O14627 284 aaPredicted RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 GPR39O43194 453 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ADAM11O75078 769 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 PIGRP01833 764 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 TNNC2P02585 160 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MAOBP27338 520 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 HOXD13P35453 343 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 OPRD1P41143 372 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CYP2J2P51589 502 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 RBP5P82980 135 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZXDBP98169 803 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 DHCR24Q15392 516 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SOWAHAQ2M3V2 549 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 TPGS1Q6ZTW0 290 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CBWD2Q8IUF1 395 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 BRSK2Q8IWQ3 736 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MMGT1Q8N4V1 131 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 NEK11Q8NG66 645 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZC3H10Q96K80 434 aaKnown RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 FNBP1Q96RU3 617 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 FIZ1Q96SL8 496 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 RNF38Q9H0F5 515 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 KLHL25Q9H0H3 589 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MBD1Q9UIS9 605 aaPredicted RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 KLK13Q9UKR3 277 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 GREB1Q4ZG55 1949 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 LRRIQ3A6PVS8 624 aaPredicted RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 K7EQS6 105 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF185O15231 689 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 POLR3GO15318 223 aaPredicted RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 TACC1O75410 805 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MOCS3O95396 460 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SERPING1P05155 500 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ITGAVP06756 1048 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MCM3P25205 808 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 LHX1P48742 406 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF131P52739 623 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SHC2P98077 582 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 GFPT1Q06210 699 aaPredicted RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 C10orf76Q5T2E6 689 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 KIAA1324Q6UXG2 1013 aaKnown RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 C12orf40Q86WS4 652 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF227Q86WZ6 799 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 NELFCDQ8IXH7 590 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 IL17RCQ8NAC3 791 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 WHAMMQ8TF30 809 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 PCED1BQ96HM7 432 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CAMK1GQ96NX5 476 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SLITRK1Q96PX8 696 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SLC6A17Q9H1V8 727 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM206Q9H813 350 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 CRTAC1Q9NQ79 661 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 PLK2Q9NYY3 685 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 AIPL1Q9NZN9 384 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 HSFX1Q9UBD0 423 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms