RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 RNF8O76064 485 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 FGF2P09038 288 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 SERPINA4P29622 427 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 LRPAP1P30533 357 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 MCM2P49736 904 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 RBM5P52756 815 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS8-228ENST00000628962 DRG2P55039 364 aaKnown RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 RPS13P62277 151 aaKnown RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 PSG6Q00889 435 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ATP1A4Q13733 1029 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 SEC23BQ15437 767 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 MANEALQ5VSG8 457 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ANO7Q6IWH7 933 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ACAD10Q6JQN1 1059 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 SYT13Q7L8C5 426 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 ZNF280BQ86YH2 543 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 SFTPA1Q8IWL2 248 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ANKRD52Q8NB46 1076 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 TDRD7Q8NHU6 1098 aaKnown RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 ABHD5Q8WTS1 349 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 NR4A3Q92570 626 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ZNF668Q96K58 619 aaPredicted RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 FAM227BQ96M60 508 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 PRR25Q96S07 402 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 TREX2Q9BQ50 279 aaPredicted RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 CENPOQ9BU64 300 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 DPCDQ9BVM2 203 aaPredicted RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 AGXT2Q9BYV1 514 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ACAD9Q9H845 621 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 G6PC2Q9NQR9 355 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 NSMCE4AQ9NXX6 385 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 DNMT3BQ9UBC3 853 aaKnown RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 DNAJB11Q9UBS4 358 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 GPR34Q9UPC5 381 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 DERAQ9Y315 318 aa3.53□□□□□ -1.84
VPS8-228ENST00000628962 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 CDK12Q9NYV4 1490 aaPredicted RBP3.53□□□□□ -1.84
VPS8-228ENST00000628962 C3P01024 1663 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 HECW1Q76N89 1606 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 VWDEQ8N2E2 1590 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 TIPRLO75663 272 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 MT-CO3P00414 261 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 ARP10275 920 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 CHMP24386 653 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 KRT20P35900 424 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 RAD52P43351 418 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 ARF3P61204 181 aaPredicted RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 ARF1P84077 181 aaKnown RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS8-228ENST00000628962 MYO1EQ12965 1108 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 GRM4Q14833 912 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 GPR68Q15743 365 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 TSTQ16762 297 aaKnown RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 CCDC96Q2M329 555 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 P3H1Q32P28 736 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 CTXN3Q4LDR2 81 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 AWAT1Q58HT5 328 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 FAM133BQ5BKY9 247 aaKnown RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 TTC22Q5TAA0 569 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 DEPDC1Q5TB30 811 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 ABLIM2Q6H8Q1 611 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 DPY19L3Q6ZPD9 716 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 CCDC129Q6ZRS4 1044 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 BBS12Q6ZW61 710 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 BRINP3Q76B58 766 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 ANKS1BQ7Z6G8 1248 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 CAND1Q86VP6 1230 aaKnown RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 CHD1LQ86WJ1 897 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 ABRAQ8N0Z2 381 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 MMP21Q8N119 569 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 DNAJB14Q8TBM8 379 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 OSCP1Q8WVF1 389 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 HMGB4Q8WW32 186 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 PPP2R3CQ969Q6 453 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 FAM84BQ96KN1 310 aaPredicted RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 SERINC2Q96SA4 455 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 REEP2Q9BRK0 252 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 CXorf36Q9H7Y0 433 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 PRKRIP1Q9H875 184 aaPredicted RBP3.52□□□□□ -1.85
VPS8-228ENST00000628962 KCND3Q9UK17 655 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 AMFRQ9UKV5 643 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 NFU1Q9UMS0 254 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 DNAJC16Q9Y2G8 782 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 ZMYM4Q5VZL5 1548 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 C9orf84Q5VXU9 1444 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 NOTCH3Q9UM47 2321 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 LRP6O75581 1613 aa3.52□□□□□ -1.85
VPS8-228ENST00000628962 PI4KAP2A4QPH2 592 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 OR2W5A6NFC9 320 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 B4DLN1 442 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 STX16-NPEPL1H3BU86 382 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 STX16O14662 325 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 RPP40O75818 363 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 TFRCP02786 760 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 CNPP09543 421 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 PLA2G2AP14555 144 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 CPA1P15085 419 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 KCNA3P22001 575 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 RBL1P28749 1068 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms