RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FNDC3BQ53EP0 1204 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 C4orf22Q6V702 233 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SAE1Q9UBE0 346 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 LGALS13Q9UHV8 139 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 EPOPA6NHQ4 379 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 E9PAM4 449 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 JCHAINP01591 159 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 HDAC4P56524 1084 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SEPT6Q14141 434 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SETDB1Q15047 1291 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 FBXW10Q5XX13 1052 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 GAREM2Q75VX8 874 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 MAFAQ8NHW3 353 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 TFB1MQ8WVM0 346 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 RMDN1Q96DB5 314 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 CEP295NLQ96MC4 621 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SERPINB12Q96P63 405 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 NPY6RQ99463 290 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 CEP41Q9BYV8 373 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 KLC2Q9H0B6 622 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 HSFX1Q9UBD0 423 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZFP37Q9Y6Q3 630 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 RHOAP61586 193 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 KYNUQ16719 465 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 PREPLQ4J6C6 727 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 CCDC38Q502W7 563 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 ITPRIPL1Q6GPH6 555 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 ANKRD42Q8N9B4 389 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 DEPDC1BQ8WUY9 529 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 SENP1Q9P0U3 644 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 DNPEPQ9ULA0 475 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 TDRD15B5MCY1 1934 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 POC1B-GALNT4F8VUJ3 575 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 KCNK1O00180 336 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 FGF10O15520 208 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 SLC25A11Q02978 314 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 PCSK7Q16549 785 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 CHPFQ8IZ52 775 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 RIBC1Q8N443 379 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 FRMD8Q9BZ67 464 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 NCOR1O75376 2440 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 PRR23AA6NEV1 266 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 CDH16O75309 829 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 RASSF9O75901 435 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 CDKN2BP42772 138 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 STARD3Q14849 445 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 BBS7Q8IWZ6 715 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 NDUFAF2Q8N183 169 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 FAM71DQ8N9W8 422 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 MRRFQ96E11 262 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 TSNARE1Q96NA8 513 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 PRMT1Q99873 361 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
SYNGAP1-207ENST00000628646 MSH2P43246 934 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 KLHL38Q2WGJ6 581 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 HABP4Q5JVS0 413 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 LY6G5CQ5SRR4 150 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 PM20D1Q6GTS8 502 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 RTL10Q7L3V2 364 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 LRRC34Q8IZ02 419 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 LZTR1Q8N653 840 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZNF557Q8N988 423 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 CCDC197Q8NCU1 140 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 LRRN4Q8WUT4 740 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 hCG_1818297A0A087WSY0 165 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 CLDN11O75508 207 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 GAD2Q05329 585 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 PKDCCQ504Y2 493 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 POLNQ7Z5Q5 900 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 PPP1R14CQ8TAE6 165 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 IRF7Q92985 503 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 NT5MQ9NPB1 228 aa12.71□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZSCAN5DPP0CG00 497 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 IL1R2P27930 398 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 WASP42768 502 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZNF135P52742 658 aaPredicted RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 CA9Q16790 459 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 P3H1Q32P28 736 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 BBS9Q3SYG4 887 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 FYB2Q5VWT5 728 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 ALLCQ8N6M5 410 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 SUSD6Q92537 303 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 ARHGEF2Q92974 986 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 ATP2A3Q93084 1043 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms