RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SYT13Q7L8C5 426 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 VPS52Q8N1B4 723 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 PELI3Q8N2H9 469 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 FAM110DQ8TAY7 271 aaPredicted RBP3.66□□□□□ -1.82
VBP1-204ENST00000625964 CSGALNACT1Q8TDX6 532 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 NPAS1Q99742 590 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 ARPC5LQ9BPX5 153 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 TMEM204Q9BSN7 226 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 DDX23Q9BUQ8 820 aaKnown RBP3.66□□□□□ -1.82
VBP1-204ENST00000625964 TRIM31Q9BZY9 425 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 ARHGAP39Q9C0H5 1083 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 SAYSD1Q9NPB0 183 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 SPAG4Q9NPE6 437 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 FZD3Q9NPG1 666 aa3.66□□□□□ -1.82
VBP1-204ENST00000625964 SRP68Q9UHB9 627 aaKnown RBP3.66□□□□□ -1.82
VBP1-204ENST00000625964 TCRBV7S3A2A0A539 114 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 ATG13O75143 517 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 IGKV3-20P01619 116 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 LYL1P12980 280 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 PKMP14618 531 aaKnown RBP3.65□□□□□ -1.82
VBP1-204ENST00000625964 HOXB9P17482 250 aaPredicted RBP3.65□□□□□ -1.82
VBP1-204ENST00000625964 RBM5P52756 815 aaKnown RBP eCLIP3.65□□□□□ -1.82
VBP1-204ENST00000625964 RHAGQ02094 409 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 ZBTB16Q05516 673 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 ALKBH1Q13686 389 aaKnown RBP3.65□□□□□ -1.82
VBP1-204ENST00000625964 GXYLT1Q4G148 440 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 ENTPD8Q5MY95 495 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 FAM83BQ5T0W9 1011 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 TTLL5Q6EMB2 1281 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 RNF144BQ7Z419 303 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 TMEM217Q8N7C4 229 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 FSIP1Q8NA03 581 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 OR6Y1Q8NGX8 325 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 TMEM174Q8WUU8 243 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 TRAPPC12Q8WVT3 735 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 LPAR1Q92633 364 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 CAMK1GQ96NX5 476 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 IL21RQ9HBE5 538 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 ZNF304Q9HCX3 659 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 PTPRHQ9HD43 1115 aa3.65□□□□□ -1.82
VBP1-204ENST00000625964 ERRFI1Q9UJM3 462 aaPredicted RBP3.65□□□□□ -1.82
VBP1-204ENST00000625964 FAM90A20PA6NIJ5 464 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 NPIPB13A6NJU9 1138 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 NPIPB5A8MRT5 1133 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 NPIPB4C9JG80 1138 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 H0YGN5 161 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 FGF2P09038 288 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 CHN1P15882 459 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 KLRC2P26717 231 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 GSTM2P28161 218 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 CYP2J2P51589 502 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 CUL4BQ13620 913 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 DCTN1Q14203 1278 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 POSTNQ15063 836 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 GRAMD1BQ3KR37 738 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 ODF3L2Q3SX64 289 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 ASPHD1Q5U4P2 390 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 KDELC2Q7Z4H8 507 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 IGFN1Q86VF2 1251 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 GALNT15Q8N3T1 639 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 SLC25A41Q8N5S1 370 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 PTGR2Q8N8N7 351 aaPredicted RBP3.65□□□□□ -1.83
VBP1-204ENST00000625964 CCT6BQ92526 530 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 FAM167BQ9BTA0 163 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 TASP1Q9H6P5 420 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 ACAD9Q9H845 621 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 G6PC2Q9NQR9 355 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 RIPOR2Q9Y4F9 1068 aa3.65□□□□□ -1.83
VBP1-204ENST00000625964 SYN3O14994 580 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 SEPT4O43236 478 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 NBNO60934 754 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 TCEA3O75764 348 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 LCKP06239 509 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 ACP5P13686 325 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 TBXAS1P24557 533 aaPredicted RBP3.64□□□□□ -1.83
VBP1-204ENST00000625964 TYK2P29597 1187 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 GRK6P43250 576 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 SMAD1Q15797 465 aaKnown RBP3.64□□□□□ -1.83
VBP1-204ENST00000625964 RUNDC3AQ59EK9 446 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 FAM171A1Q5VUB5 890 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 MTFR2Q6P444 385 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 PDXDC1Q6P996 788 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 SCN4BQ8IWT1 228 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 THAP4Q8WY91 577 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.64□□□□□ -1.83
VBP1-204ENST00000625964 FRMD8Q9BZ67 464 aaPredicted RBP3.64□□□□□ -1.83
VBP1-204ENST00000625964 MYLK2Q9H1R3 596 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 ACTR5Q9H9F9 607 aaPredicted RBP3.64□□□□□ -1.83
VBP1-204ENST00000625964 PLEKHA2Q9HB19 425 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 Q9N2J8 555 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 PNRC2Q9NPJ4 139 aaKnown RBP3.64□□□□□ -1.83
VBP1-204ENST00000625964 TMEM248Q9NWD8 314 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 KLQ9UEF7 1012 aa3.64□□□□□ -1.83
VBP1-204ENST00000625964 NOTCH3Q9UM47 2321 aa3.63□□□□□ -1.83
VBP1-204ENST00000625964 NTN3O00634 580 aaPredicted RBP3.63□□□□□ -1.83
VBP1-204ENST00000625964 MDM4O15151 490 aa3.63□□□□□ -1.83
VBP1-204ENST00000625964 CCNT1O60563 726 aaKnown RBP3.63□□□□□ -1.83
VBP1-204ENST00000625964 TFRCP02786 760 aaKnown RBP3.63□□□□□ -1.83
VBP1-204ENST00000625964 ADD2P35612 726 aa3.63□□□□□ -1.83
VBP1-204ENST00000625964 SLC16A2P36021 539 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms