RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 FIBINQ8TAL6 211 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 RNF34Q969K3 372 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 CAMK1GQ96NX5 476 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 SLC4A5Q9BY07 1137 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 POPDC2Q9HBU9 364 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 TJP2Q9UDY2 1190 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 MRFAP1Q9Y605 127 aa16.59■□□□□ 0.25
CD40-207ENST00000620709 KMT2BQ9UMN6 2715 aaPredicted RBP16.59■□□□□ 0.25
CD40-207ENST00000620709 BCAT2O15382 392 aaPredicted RBP16.58■□□□□ 0.24
CD40-207ENST00000620709 TRUB2O95900 331 aaKnown RBP16.58■□□□□ 0.24
CD40-207ENST00000620709 MMP8P22894 467 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 ACSL1P33121 698 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 RPL34P49207 117 aaKnown RBP16.58■□□□□ 0.24
CD40-207ENST00000620709 YWHAZP63104 245 aaKnown RBP16.58■□□□□ 0.24
CD40-207ENST00000620709 PDCLQ13371 301 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 TAF5Q15542 800 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 PIP4P1Q86T03 277 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 MSANTD4Q8NCY6 345 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 ZNF564Q8TBZ8 553 aaPredicted RBP16.58■□□□□ 0.24
CD40-207ENST00000620709 DNASE2BQ8WZ79 361 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 SLC39A13Q96H72 371 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 C11orf70Q9BRQ4 267 aa16.58■□□□□ 0.24
CD40-207ENST00000620709 C6orf106Q9H6K1 298 aaPredicted RBP16.58■□□□□ 0.24
CD40-207ENST00000620709 C1QTNF9BB2RNN3 333 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 HYAL3O43820 417 aaPredicted RBP16.57■□□□□ 0.24
CD40-207ENST00000620709 SH3BP5O60239 455 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 GRAP2O75791 330 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 FSBPO95073 299 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 IGLV3-19P01714 112 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 C1QTNF9P0C862 333 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 CD59P13987 128 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 TACR2P21452 398 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 FAM193AP78312 1265 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 PITX1P78337 314 aaPredicted RBP16.57■□□□□ 0.24
CD40-207ENST00000620709 TTC31Q49AM3 519 aaPredicted RBP16.57■□□□□ 0.24
CD40-207ENST00000620709 FSCBQ5H9T9 825 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 SLFN11Q7Z7L1 901 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 TMEM110Q86TL2 294 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 ATP6V0D2Q8N8Y2 350 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 SCNM1Q9BWG6 230 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 BTBD1Q9H0C5 482 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 DNAAF2Q9NVR5 837 aaKnown RBP16.57■□□□□ 0.24
CD40-207ENST00000620709 SLC12A6Q9UHW9 1150 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 CDC23Q9UJX2 597 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 SAR1BQ9Y6B6 198 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 SCINQ9Y6U3 715 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 CACNA1EQ15878 2313 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 MUC22E2RYF6 1773 aaPredicted RBP16.57■□□□□ 0.24
CD40-207ENST00000620709 NUMA1Q14980 2115 aa16.57■□□□□ 0.24
CD40-207ENST00000620709 FAM47DPA6NHR8 397 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 F5H5T6 163 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 LUC7L3O95232 432 aaKnown RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 SEMA4FO95754 770 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 FTCDO95954 541 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 RRM1P23921 792 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 CTSOP43234 321 aaPredicted RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 TERF1P54274 439 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 NNTQ13423 1086 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 PITRM1Q5JRX3 1037 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 MEI1Q5TIA1 1274 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 RNF219Q5W0B1 726 aaPredicted RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 ZNF776Q68DI1 518 aaPredicted RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 OR6B2Q6IFH4 312 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 UNQ6494/PRO21346Q6UXR6 183 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 ERICH1Q86X53 443 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 DEFB106AQ8N104 65 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 TTC17Q96AE7 1141 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 ADAM33Q9BZ11 813 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 ZDHHC5Q9C0B5 715 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 GAREM1Q9H706 876 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 FBRSQ9HAH7 460 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 MRPL47Q9HD33 250 aaKnown RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 KIAA1522Q9P206 1035 aaPredicted RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 INTS6Q9UL03 887 aaKnown RBP16.56■□□□□ 0.24
CD40-207ENST00000620709 SNX12Q9UMY4 172 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 NCKAP1Q9Y2A7 1128 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 HYOU1Q9Y4L1 999 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 USP24Q9UPU5 2620 aa16.56■□□□□ 0.24
CD40-207ENST00000620709 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 UPK3BL1B0FP48 263 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 UPK3BL2E5RIL1 263 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 RNASEH1O60930 286 aaKnown RBP16.55■□□□□ 0.24
CD40-207ENST00000620709 SIN3BO75182 1162 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 ASLP04424 464 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 PRLRP16471 622 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 TCP1P17987 556 aaKnown RBP16.55■□□□□ 0.24
CD40-207ENST00000620709 RDXP35241 583 aaKnown RBP16.55■□□□□ 0.24
CD40-207ENST00000620709 CSNK1EP49674 416 aaKnown RBP16.55■□□□□ 0.24
CD40-207ENST00000620709 BEND5Q7L4P6 421 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 PEX26Q7Z412 305 aa16.55■□□□□ 0.24
CD40-207ENST00000620709 CIR1Q86X95 450 aaPredicted RBP16.55■□□□□ 0.24
CD40-207ENST00000620709 NAXDQ8IW45 347 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms