RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 LRRC72A6NJI9 287 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 C2CD4BA6NLJ0 364 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 C10orf142B7Z368 130 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 K7ERQ8 282 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 KCNK3O14649 394 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 BNIP3LO60238 219 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 CER1O95813 267 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 SRCP12931 536 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 GLDCP23378 1020 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 GRIA4P48058 902 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 ADPRHP54922 357 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 TEAD4Q15561 434 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 CLEC16AQ2KHT3 1053 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 POM121L1PQ3SYA9 428 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 IL27RAQ6UWB1 636 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 LRSAM1Q6UWE0 723 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 LINGO4Q6UY18 593 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.6■□□□□ 0.41
HMGN3-203ENST00000620514 SETD3Q86TU7 594 aaPredicted RBP17.6■□□□□ 0.41
HMGN3-203ENST00000620514 OR7D4Q8NG98 312 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 OR8D1Q8WZ84 308 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 SLC6A18Q96N87 628 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 MAGEB5Q9BZ81 275 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 TM7SF3Q9NS93 570 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 ZNF212Q9UDV6 495 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 PLXNA2O75051 1894 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 KNL1Q8NG31 2342 aa17.6■□□□□ 0.41
HMGN3-203ENST00000620514 EPG5Q9HCE0 2579 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 MAP1BP46821 2468 aaKnown RBP17.59■□□□□ 0.41
HMGN3-203ENST00000620514 WNT9AO14904 365 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 TEX33O43247 280 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 SMAD6O43541 496 aaKnown RBP17.59■□□□□ 0.41
HMGN3-203ENST00000620514 RRM1P23921 792 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 OR1E1P30953 314 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 SDC4P31431 198 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 NSFP46459 744 aaKnown RBP17.59■□□□□ 0.41
HMGN3-203ENST00000620514 PPP2CBP62714 309 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 PPP2CAP67775 309 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 KRT83P78385 493 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 C6orf118Q5T5N4 469 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 ATP11CQ8NB49 1132 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 PIP4K2CQ8TBX8 421 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 C2orf49Q9BVC5 232 aaPredicted RBP17.59■□□□□ 0.41
HMGN3-203ENST00000620514 SCNM1Q9BWG6 230 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 SEPT11Q9NVA2 429 aaKnown RBP17.59■□□□□ 0.41
HMGN3-203ENST00000620514 TMEM51Q9NW97 253 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 ADAM22Q9P0K1 906 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 PPM1HQ9ULR3 514 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 HS3ST2Q9Y278 367 aa17.59■□□□□ 0.41
HMGN3-203ENST00000620514 MCF2LO15068 1137 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 HYAL3O43820 417 aaPredicted RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 RTN2O75298 545 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 WNT1P04628 370 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 CTSLP07711 333 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 ZNF883P0CG24 379 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 RFC1P35251 1148 aaPredicted RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 CCR5P51681 352 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 TRIP6Q15654 476 aaKnown RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 ACBD5Q5T8D3 534 aaPredicted RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 ADAT2Q7Z6V5 191 aaKnown RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 DSG4Q86SJ6 1040 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 PHF13Q86YI8 300 aaPredicted RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 DCAF4L2Q8NA75 395 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 SETD7Q8WTS6 366 aaKnown RBP17.58■□□□□ 0.4
HMGN3-203ENST00000620514 FAM131CQ96AQ9 280 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 AGPAT1Q99943 283 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 SPON2Q9BUD6 331 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 ZYG11BQ9C0D3 744 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 PCOLCE2Q9UKZ9 415 aa17.58■□□□□ 0.4
HMGN3-203ENST00000620514 CEP295Q9C0D2 2601 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 DOCK4Q8N1I0 1966 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TMEM131Q92545 1883 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3DA0A087WVF3 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3IA0A087WXS9 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3EA0A087X179 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3KA0A087X1G2 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3FA6NER0 549 aaPredicted RBP17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3LB9A6J9 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 FAM72CH0Y354 149 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 H0Y8X5 98 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 RNF103O00237 685 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 ALOX15BO15296 676 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CBFA2T3O75081 653 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3HP0C7X1 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 KRT3P12035 628 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 ADRA1BP35368 520 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CTSKP43235 329 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 PTPN9P43378 593 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 HDAC4P56524 1084 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 GSCP56915 257 aaPredicted RBP17.57■□□□□ 0.4
HMGN3-203ENST00000620514 RACK1P63244 317 aaKnown RBP17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CNTN1Q12860 1018 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 HNRNPDQ14103 355 aaKnown RBP17.57■□□□□ 0.4
HMGN3-203ENST00000620514 ST3GAL2Q16842 350 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 FAM72AQ5TYM5 149 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 FAM46CQ5VWP2 391 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3GQ6DHY5 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3CQ6IPX1 549 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 FAM72DQ6L9T8 149 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CAVIN1Q6NZI2 390 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms