RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 TAF12Q16514 161 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 IZUMO3Q5VZ72 239 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RPS27LQ71UM5 84 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 LRRC20Q8TCA0 184 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 GPR88Q9GZN0 384 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ETNK2Q9NVF9 386 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SERPINB13Q9UIV8 391 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PRR12Q9ULL5 1215 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MYOM2P54296 1465 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SH3D21A4FU49 640 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 OR14I1A6ND48 311 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CES1P23141 567 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ACADLP28330 430 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FOLH1Q04609 750 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 STRA8Q7Z7C7 330 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TBC1D15Q8TC07 691 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PCDHB16Q9NRJ7 776 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TBC1D22BQ9NU19 505 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ERGIC3Q9Y282 383 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PIPSLA2A3N6 862 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SPTLC1O15269 473 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CCNKO75909 580 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 LDLRP01130 860 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FDX1P10109 184 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FGFR3P22607 806 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ARSEP51690 589 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PTK6Q13882 451 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 GNA13Q14344 377 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CA9Q16790 459 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TWF2Q6IBS0 349 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 SLC39A4Q6P5W5 647 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CEP41Q9BYV8 373 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PREBQ9HCU5 417 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MAGEB2O15479 319 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 HOXB8P17481 243 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 GSSP48637 474 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MAMLD1Q13495 774 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 AKAP14Q86UN6 197 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PPIL6Q8IXY8 311 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FBXW8Q8N3Y1 598 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MARK4Q96L34 752 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CACNG4Q9UBN1 327 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 XPO7Q9UIA9 1087 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 GRIN2AQ12879 1464 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 E5RJQ4 531 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CLOCKO15516 846 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KCNN4O15554 427 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SGTAO43765 313 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SFT2D3Q587I9 215 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DEPDC1Q5TB30 811 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KCNMB3Q9NPA1 279 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CDH9Q9ULB4 789 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PNPLA7Q6ZV29 1317 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 BICRAQ9NZM4 1560 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CAP1Q01518 475 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 STX4Q12846 297 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DDR2Q16832 855 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MUC13Q9H3R2 512 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ELAC1Q9H777 363 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 METTL8Q9H825 291 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 SSR3Q9UNL2 185 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RBM47A0AV96 593 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ZNF701M0R085 212 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 CCDC85BQ15834 202 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PLET1Q6UQ28 207 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PAGE2Q7Z2X7 111 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TAGAPQ8N103 731 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SERHL2Q9H4I8 314 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SERHLQ9NQF3 203 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MED11Q9P086 117 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PCDHGB6Q9Y5F9 930 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 COL6A2P12110 1019 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ITGB5P18084 799 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TAF8Q7Z7C8 310 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ERO1BQ86YB8 467 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RFX6Q8HWS3 928 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 OR5T2Q8NGG2 359 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 OR14K1Q8NGZ2 314 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ZNF420Q8TAQ5 688 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 AURKBQ96GD4 344 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 WNK4Q96J92 1243 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MMP27Q9H306 513 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ITM2CQ9NQX7 267 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ARMC1Q9NVT9 282 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 NCKIPSDQ9NZQ3 722 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CCNL1Q9UK58 526 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 GINS2Q9Y248 185 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RIPK3Q9Y572 518 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ENO2P09104 434 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TSPAN8P19075 237 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GUCA1AP43080 201 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 YARSP54577 528 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PIGFQ07326 219 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ERICH5Q6P6B1 374 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TCTEX1D2Q8WW35 142 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SLC35C1Q96A29 364 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ABHD8Q96I13 439 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BBS2Q9BXC9 721 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SOX17Q9H6I2 414 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 MAN1C1Q9NR34 630 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms