RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LRRC45Q96CN5 670 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 BTN2A3PQ96KV6 586 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SPACA7Q96KW9 195 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RUNDC3BQ96NL0 473 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RUFY1Q96T51 708 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 NAP1L3Q99457 506 aaPredicted RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 NCAPGQ9BPX3 1015 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RHOXF2Q9BQY4 288 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 BBS2Q9BXC9 721 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 FAM129AQ9BZQ8 928 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TKTL2Q9H0I9 626 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 GOLPH3Q9H4A6 298 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 ARHGEF4Q9NR80 690 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 PARVAQ9NVD7 372 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 VPS18Q9P253 973 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TRIM10Q9UDY6 481 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 GMEB2Q9UKD1 530 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 INTS6Q9UL03 887 aaKnown RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 STAP1Q9ULZ2 295 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SCML1Q9UN30 329 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 DUSP10Q9Y6W6 482 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CHD8Q9HCK8 2581 aa5.4□□□□□ -1.55
SHMT1-211ENST00000618902 KIAA1549LQ6ZVL6 1849 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CHD5Q8TDI0 1954 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 IGLV3-10A0A075B6K4 115 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 GOLGA6BA6NDN3 693 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 DRGXA6NNA5 263 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 NEDD8-MDP1E9PL57 170 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 EBAG9O00559 213 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SHOX2O60902 331 aaPredicted RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 TBL1XO60907 577 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 RNF40O75150 1001 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 MTA2O94776 668 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 PROSCO94903 275 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SEC31AO94979 1220 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 APOEP02649 317 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ASLP04424 464 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ATP1A1P05023 1023 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ATP5BP06576 529 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 PSMA2P25787 234 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 HLA-FP30511 346 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 OXTRP30559 389 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 NTSR1P30989 418 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CD70P32970 193 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 KIR2DL1P43626 348 aaPredicted RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LMAN1P49257 510 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 DGKGP49619 791 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ARSEP51690 589 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LIMK1P53667 647 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 AIF1P55008 147 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SKOR1P84550 965 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SLC25A11Q02978 314 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SULT2A1Q06520 285 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SCAPQ12770 1279 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LMAN2Q12907 356 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 PDAP1Q13442 181 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ENPP2Q13822 863 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 STARD3Q14849 445 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 TCEAL1Q15170 157 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 GEN1Q17RS7 908 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ATP13A4Q4VNC1 1196 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ALFQ53S48 1182 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 BRMS1LQ5PSV4 323 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CFAP58Q5T655 872 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 GRAMD4Q6IC98 578 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CXorf57Q6NSI4 855 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LRIG3Q6UXM1 1119 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SND1Q7KZF4 910 aaKnown RBP eCLIP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 MAATS1Q7Z4T9 603 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 KIAA0907Q7Z7F0 614 aaPredicted RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CHSY1Q86X52 802 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 NIPA2Q8N8Q9 360 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ATP6V0D2Q8N8Y2 350 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LRRN4CLQ8ND94 238 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CEP76Q8TAP6 659 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SLC35G2Q8TBE7 412 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF564Q8TBZ8 553 aaPredicted RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 FNIP1Q8TF40 1166 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SORCS1Q8WY21 1168 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 RNF34Q969K3 372 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 NTAN1Q96AB6 310 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 TMA16Q96EY4 203 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ALG14Q96F25 216 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 TRIM11Q96F44 468 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 C1orf74Q96LT6 269 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 HAPLN3Q96S86 360 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 KCTD15Q96SI1 283 aaPredicted RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ACOX2Q99424 681 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 GABRG3Q99928 467 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SH3GL2Q99962 352 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SNRNP25Q9BV90 132 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SIK2Q9H0K1 926 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 OSBPL2Q9H1P3 480 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 RASSF4Q9H2L5 321 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 NOL6Q9H6R4 1146 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 WDCPQ9H6R7 721 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms