RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 MLH1P40692 756 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 SLC9B1Q4ZJI4 515 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 C9orf57Q5W0N0 161 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 NAPRTQ6XQN6 538 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 CMC1Q7Z7K0 106 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 HPS6Q86YV9 775 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 PLD6Q8N2A8 252 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 RDH11Q8TC12 318 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 EMID1Q96A84 441 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 NPY6RQ99463 290 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 PRDM12Q9H4Q4 367 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 C6orf203Q9P0P8 240 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 PSMD13Q9UNM6 376 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ZCWPW2A0A1B0GU75 182 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ASB14A6NK59 587 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ERI2A8K979 691 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 TRIM13O60858 407 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 APOA4P06727 396 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 NCF2P19878 526 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ADORA2BP29275 332 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 PRKAA2P54646 552 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 HERC3Q15034 1050 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 KCTD11Q693B1 232 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 UGT2A3Q6UWM9 527 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ALKAL1Q6UXT8 129 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 PPTC7Q8NI37 304 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 MAPK15Q8TD08 544 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ZNF669Q96BR6 464 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 CCDC124Q96CT7 223 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 OXCT2Q9BYC2 517 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 COMMD3-BMI1R4GMX3 469 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 COL4A4P53420 1690 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 SMIM31A0A1B0GVY4 71 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 KLHL33A6NCF5 533 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 HCRTO43612 131 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 TIMM44O43615 452 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 FBXO21O94952 628 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 PTPN3P26045 913 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 ADSLP30566 484 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 GMPRP36959 345 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 HADHAP40939 763 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 GRIA2P42262 883 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 CHN2P52757 468 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 DLG1Q12959 904 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 USP4Q13107 963 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 TRIP10Q15642 601 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 CFAP157Q5JU67 520 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 FSTL4Q6MZW2 842 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 STRA8Q7Z7C7 330 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 SETD3Q86TU7 594 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 LCA5Q86VQ0 697 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 PQLC1Q8N2U9 271 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 MARVELD2Q8N4S9 558 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 CPSF7Q8N684 471 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 C18orf25Q96B23 403 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 SLC2A13Q96QE2 648 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 C16orf70Q9BSU1 422 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 DNAI2Q9GZS0 605 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 TCF7L2Q9NQB0 619 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 ANKRD6Q9Y2G4 727 aa13.17□□□□□ -0.3
CLTCL1-210ENST00000617926 A0A096LPK6 155 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 E9PBE3 544 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 MATN2O00339 956 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 PIRO00625 290 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 KLHL41O60662 606 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 SMIM18P0DKX4 95 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 THRAP10827 490 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 AKR1A1P14550 325 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 DNAJB1P25685 340 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 PIK3R1P27986 724 aa13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-210ENST00000617926 NOS2P35228 1153 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms