RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 PTPN5P54829 565 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 PDIA2Q13087 525 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 STAT4Q14765 748 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 RARS2Q5T160 578 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 C6orf118Q5T5N4 469 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 TMCO4Q5TGY1 634 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 PIK3R6Q5UE93 754 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 PALM2Q8IXS6 379 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 ATP11CQ8NB49 1132 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 GLIS1Q8NBF1 620 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 CCDC110Q8TBZ0 833 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 PYROXD1Q8WU10 500 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 PRRX2Q99811 253 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 ATXN3LQ9H3M9 355 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 CDC42EP4Q9H3Q1 356 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 C10orf88Q9H8K7 445 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 DZANK1Q9NVP4 752 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 FAM53CQ9NYF3 392 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 IGSF9Q9P2J2 1179 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 MYO10Q9HD67 2058 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZNF197O14709 1029 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 MATN3O15232 486 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 RAMP2O60895 175 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 CLDN11O75508 207 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 PDGFBP01127 241 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 CKMP06732 381 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 ABHD2P08910 425 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 GSTA2P09210 222 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 SPATA31D3P0C874 917 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 OAS2P29728 719 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 AVPR2P30518 371 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 CORO1AP31146 461 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 RENBPP51606 427 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 CLCN4P51793 760 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 CDH4P55283 916 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 SEMA5AQ13591 1074 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 KRT71Q3SY84 523 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 ADGRF1Q5T601 910 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 FBXL22Q6P050 247 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 SPATA31D4Q6ZUB0 917 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 CCNJLQ8IV13 435 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 LGI2Q8N0V4 545 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 FATE1Q969F0 183 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 RIPOR3Q96MK2 946 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 SP110Q9HB58 689 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZDHHC7Q9NXF8 308 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 RSPH14Q9UHP6 348 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 SH3BP1Q9Y3L3 701 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 SNX10Q9Y5X0 201 aa17.16■□□□□ 0.34
TRAPPC3-210ENST00000617904 I6L893 689 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 ALOX15BO15296 676 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 ANXA9O76027 345 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 MYL4P12829 197 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 MLNP12872 115 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 OR1E1P30953 314 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 OXCT1P55809 520 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 SLC29A2Q14542 456 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 KCNJ11Q14654 390 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 CCDC38Q502W7 563 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 TEX44Q53QW1 395 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 PRUNE1Q86TP1 453 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 LINC00523Q86TU6 105 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 DENND1CQ8IV53 801 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 ARFGAP2Q8N6H7 521 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 NAT9Q9BTE0 207 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 TMEM109Q9BVC6 243 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 KLF16Q9BXK1 252 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 SEMA4AQ9H3S1 761 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 SORCS3Q9UPU3 1222 aa17.15■□□□□ 0.34
TRAPPC3-210ENST00000617904 GREB1Q4ZG55 1949 aa17.14■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 A6NNZ2 444 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 STC2O76061 302 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 POU2F2P09086 479 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 CCNB1P14635 433 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 CHKAP35790 457 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 IFI35P80217 286 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF177Q13360 481 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 POLD3Q15054 466 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 BBS9Q3SYG4 887 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 TUBB8Q3ZCM7 444 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 C5orf22Q49AR2 442 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 ATAT1Q5SQI0 421 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 CHST9Q7L1S5 443 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 UBALD2Q8IYN6 164 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 RIBC1Q8N443 379 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 CELF6Q96J87 481 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 CORO1BQ9BR76 489 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 CENPHQ9H3R5 247 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAN1C1Q9NR34 630 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 MPP6Q9NZW5 540 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 MFHAS1Q9Y4C4 1052 aa17.14■□□□□ 0.33
TRAPPC3-210ENST00000617904 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms