RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 CCDC117Q8IWD4 279 aaPredicted RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 PLCD3Q8N3E9 789 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 NAT16Q8N8M0 369 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 ZNF557Q8N988 423 aaPredicted RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 RSAD2Q8WXG1 361 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 UBXN4Q92575 508 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 FATE1Q969F0 183 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 RTP4Q96DX8 246 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 ALG14Q96F25 216 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 LMLNQ96KR4 655 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 RHOXF2Q9BQY4 288 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 TRIM51Q9BSJ1 452 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 FEM1AQ9BSK4 669 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 TRMT61BQ9BVS5 477 aaKnown RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 SLC2A11Q9BYW1 496 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 MUC3BQ9H195 1237 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 EPC1Q9H2F5 836 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 ECT2Q9H8V3 914 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 ATP13A1Q9HD20 1204 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 KIAA1522Q9P206 1035 aaPredicted RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 IPO11Q9UI26 975 aaKnown RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 FBXO10Q9UK96 956 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 OR51B4Q9Y5P0 310 aa8.25□□□□□ -1.09
TARDBP-219ENST00000617757 MUC22E2RYF6 1773 aaPredicted RBP8.25□□□□□ -1.09
TARDBP-219ENST00000617757 C5orf60A6NFR6 353 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 OTOL1A6NHN0 477 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 J3KR12 359 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 KCNK1O00180 336 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ARNTLO00327 626 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 MATN3O15232 486 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 HOXC11O43248 304 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 CTIFO43310 598 aaKnown RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 CACNG3O60359 315 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PRAMEF11O60813 436 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 GCATO75600 419 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ZNF189O75820 626 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 HEXIM1O94992 359 aaKnown RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 GAS8O95995 478 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PEX11BO96011 259 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ADH1CP00326 375 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 IFNB1P01574 187 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 CISD3P0C7P0 127 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ZSCAN5DPP0CG00 497 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 GLDCP23378 1020 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PTPN3P26045 913 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 HLA-FP30511 346 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 CD70P32970 193 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 RPL22P35268 128 aaKnown RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ETFBP38117 255 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 NUMBP49757 651 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 NRLP54845 237 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 OXCT1P55809 520 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 IFI35P80217 286 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 TFF2Q03403 129 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 WASHC5Q12768 1159 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 NR1H3Q13133 447 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 NAA30Q147X3 362 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PPP1R7Q15435 360 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 TRIP13Q15645 432 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 AAK1Q2M2I8 961 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 P3H1Q32P28 736 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PUS10Q3MIT2 529 aaKnown RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ANKRD20A2Q5SQ80 823 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ANKRD20A1Q5TYW2 823 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ANKRD20A3Q5VUR7 823 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 IL31Q6EBC2 164 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 CCDC70Q6NSX1 233 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 TIGD7Q6NT04 549 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 KIAA0907Q7Z7F0 614 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 APCDD1Q8J025 514 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 CPA6Q8N4T0 437 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 FAM71DQ8N9W8 422 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 MAFAQ8NHW3 353 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 MAML1Q92585 1016 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 NXPE3Q969Y0 559 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 XPO6Q96QU8 1125 aaKnown RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ERP44Q9BS26 406 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 SPON2Q9BUD6 331 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 ANKZF1Q9H8Y5 726 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 SP110Q9HB58 689 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PDFQ9HBH1 243 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PCDH9Q9HC56 1237 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 PRDM6Q9NQX0 595 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 GTSE1Q9NYZ3 720 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 SEPT10Q9P0V9 454 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
TARDBP-219ENST00000617757 INTS6Q9UL03 887 aaKnown RBP8.24□□□□□ -1.09
TARDBP-219ENST00000617757 MYLKQ15746 1914 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 TARSL2A2RTX5 802 aaKnown RBP8.23□□□□□ -1.09
TARDBP-219ENST00000617757 ZSCAN5CA6NGD5 496 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-219ENST00000617757 RNF103O00237 685 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 TRIM24O15164 1050 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 MTSS1O43312 755 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 ZMPSTE24O75844 475 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 CD160O95971 181 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 JCHAINP01591 159 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 CCNB1P14635 433 aa8.23□□□□□ -1.09
TARDBP-219ENST00000617757 IL9P15248 144 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms