RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	NFE2	Q16621	373 aa	Predicted RBP	11.77	□□□□□ -0.52
TP53-222	ENST00000617185	MSS51	Q4VC12	460 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	UGT3A1	Q6NUS8	523 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	BTLA	Q7Z6A9	289 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	DSG4	Q86SJ6	1040 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	RALGPS2	Q86X27	583 aa	Predicted RBP	11.77	□□□□□ -0.52
TP53-222	ENST00000617185	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.77	□□□□□ -0.52
TP53-222	ENST00000617185	TOR1AIP2	Q8NFQ8	470 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	RMDN1	Q96DB5	314 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	KLRG1	Q96E93	195 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	ZNF668	Q96K58	619 aa	Predicted RBP	11.77	□□□□□ -0.52
TP53-222	ENST00000617185	OR2B2	Q9GZK3	357 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	PCDH9	Q9HC56	1237 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.77	□□□□□ -0.52
TP53-222	ENST00000617185	PCDHGA8	Q9Y5G5	932 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	SNCAIP	Q9Y6H5	919 aa		11.77	□□□□□ -0.52
TP53-222	ENST00000617185	TRIM49D1	C9J1S8	452 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185		E7ESA3	106 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	ACOX3	O15254	700 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	DCX	O43602	365 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	KRT37	O76014	449 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	ADRB2	P07550	413 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	RPS12	P25398	132 aa	Known RBP	11.77	□□□□□ -0.53
TP53-222	ENST00000617185	ARL1	P40616	181 aa	Predicted RBP	11.77	□□□□□ -0.53
TP53-222	ENST00000617185	IDH3A	P50213	366 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	NUDT2	P50583	147 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	MRPS5	P82675	430 aa	Known RBP	11.77	□□□□□ -0.53
TP53-222	ENST00000617185	PPP2R2B	Q00005	443 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	LRIT3	Q3SXY7	679 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	MTERF2	Q49AM1	385 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	TJAP1	Q5JTD0	557 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	DCAF15	Q66K64	600 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	ZNF598	Q86UK7	904 aa	Known RBP	11.77	□□□□□ -0.53
TP53-222	ENST00000617185	OSTM1	Q86WC4	334 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	RHOT1	Q8IXI2	618 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	PPIL6	Q8IXY8	311 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	COLGALT2	Q8IYK4	626 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	ELMOD2	Q8IZ81	293 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	PHTF2	Q8N3S3	785 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	UBR7	Q8N806	425 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	TFAP2C	Q92754	450 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	ZUFSP	Q96AP4	578 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	KLHL32	Q96NJ5	620 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	HSPBP1	Q9NZL4	362 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	KL	Q9UEF7	1012 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	IPO11	Q9UI26	975 aa	Known RBP	11.77	□□□□□ -0.53
TP53-222	ENST00000617185	PSME2	Q9UL46	239 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.77	□□□□□ -0.53
TP53-222	ENST00000617185	SPEF1	Q9Y4P9	236 aa		11.77	□□□□□ -0.53
TP53-222	ENST00000617185	COL11A1	P12107	1806 aa	Predicted RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	WDR64	B1ANS9	1081 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	CCRL2	O00421	344 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	TNPO2	O14787	897 aa	Known RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	AKAP10	O43572	662 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	TSPAN9	O75954	239 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	SNRPA	P09012	282 aa	Known RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	KRT5	P13647	590 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ME2	P23368	584 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	GRM5	P41594	1212 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	MLLT10	P55197	1068 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	MS4A2	Q01362	244 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	CETN1	Q12798	172 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	NHSL2	Q5HYW2	709 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	TUBA3E	Q6PEY2	450 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ZCCHC23	Q6ZST2	131 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	KATNAL2	Q8IYT4	538 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	HACE1	Q8IYU2	909 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	KY	Q8NBH2	561 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ABHD11	Q8NFV4	315 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	S100Z	Q8WXG8	99 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	APBB2	Q92870	758 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	TP53INP1	Q96A56	240 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ZNF778	Q96MU6	729 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	TMEM121	Q9BTD3	319 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	SLC13A1	Q9BZW2	595 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	IRF2BPL	Q9H1B7	796 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	SEMA6A	Q9H2E6	1030 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	RAD21L1	Q9H4I0	556 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	NOL6	Q9H6R4	1146 aa	Known RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	AIM2	O14862	343 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	HAT1	O14929	419 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	TOM1L1	O75674	476 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	DSG3	P32926	999 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	GRIA3	P42263	894 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	COPZ1	P61923	177 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	PSMC5	P62195	406 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ECT2L	Q008S8	904 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	C19orf57	Q0VDD7	668 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	KLF10	Q13118	480 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	GPR162	Q16538	588 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	SEZ6	Q53EL9	994 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	LGSN	Q5TDP6	509 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ACAD10	Q6JQN1	1059 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	VSIG10L	Q86VR7	867 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	PDIK1L	Q8N165	341 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	ASCC1	Q8N9N2	400 aa	Known RBP	11.76	□□□□□ -0.53
TP53-222	ENST00000617185	FNIP1	Q8TF40	1166 aa		11.76	□□□□□ -0.53
TP53-222	ENST00000617185	RAB2B	Q8WUD1	216 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms