RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZSWIM2Q8NEG5 633 aa9.9□□□□□ -0.82
TNFRSF9-204ENST00000615230 GRIN3AQ8TCU5 1115 aa9.9□□□□□ -0.82
TNFRSF9-204ENST00000615230 CELF6Q96J87 481 aaKnown RBP9.9□□□□□ -0.82
TNFRSF9-204ENST00000615230 GMLQ99445 158 aa9.9□□□□□ -0.82
TNFRSF9-204ENST00000615230 COL22A1Q8NFW1 1626 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF9-204ENST00000615230 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 A0A1W2PQH9 124 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 ANKDD1BA6NHY2 528 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 NPC1O15118 1278 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 CORO1AP31146 461 aaKnown RBP9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 RRM2P31350 389 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 BRCC3P46736 316 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 NDST2P52849 883 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 AP1S1P61966 158 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZSCAN26Q16670 478 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPDYCQ5MJ68 293 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZNF571Q7Z3V5 609 aaPredicted RBP9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 FBXO36Q8NEA4 188 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 STK32AQ8WU08 396 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 ELMO1Q92556 727 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 MAGEH1Q9H213 219 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZNHIT2Q9UHR6 403 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 NCANO14594 1321 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 IRS2Q9Y4H2 1338 aa9.9□□□□□ -0.83
TNFRSF9-204ENST00000615230 A0A0A0MRY4 1105 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 GMNCA6NCL1 334 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ACSL4O60488 711 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ACRP10323 421 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 MIPP30301 263 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 POLD2P49005 469 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CLCN5P51795 746 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PPARDQ03181 441 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 MSLNQ13421 630 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 DDR2Q16832 855 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ESRP1Q6NXG1 681 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PRMT9Q6P2P2 845 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 FAM71AQ8IYT1 594 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CDK20Q8IZL9 346 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 DBF4BQ8NFT6 615 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 OTUB2Q96DC9 234 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 MED8Q96G25 268 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPATA13Q96N96 652 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TRIM51Q9BSJ1 452 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 RAB11FIP5Q9BXF6 653 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 NCKIPSDQ9NZQ3 722 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CHORDC1Q9UHD1 332 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 SCN11AQ9UI33 1791 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 POP4O95707 220 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 AMPD1P23109 780 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 KDELR1P24390 212 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CDK7P50613 346 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CUL3Q13618 768 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 UBXN2BQ14CS0 331 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TXNDC11Q6PKC3 985 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 EMC1Q8N766 993 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 IRF7Q92985 503 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 C8orf33Q9H7E9 229 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ACTR8Q9H981 624 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 VPS45Q9NRW7 570 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PKD1L3Q7Z443 1732 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 A0A1B0GVM2 712 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMEM150BA6NC51 233 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TCAF2A6NFQ2 919 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 INPPL1O15357 1258 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CNPP09543 421 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 COX7A2P14406 83 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PFKLP17858 780 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 GP5P40197 560 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CLK2P49760 499 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 KDSRQ06136 332 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TAF10Q12962 218 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 BHLHB9Q6PI77 547 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PRCCQ92733 491 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 GNG14A0A1W2PPG7 69 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CFAP73A6NFT4 308 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 INPP4BO15327 924 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 RGS14O43566 566 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 NDUFB5O43674 189 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCNE2O96020 404 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TACR2P21452 398 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PSMD8P48556 350 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CSE1LP55060 971 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPIDRQ14159 915 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCL14Q16627 93 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 KCNT1Q5JUK3 1230 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 SLC39A5Q6ZMH5 540 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 HERVK_113Q902F9 699 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PRICKLE1Q96MT3 831 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 EBNA1BP2Q99848 306 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 OSBPL1AQ9BXW6 950 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ING2Q9H160 280 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ATAD3AQ9NVI7 634 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ENOPH1Q9UHY7 261 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 NHSQ6T4R5 1651 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 B4GALT5O43286 388 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 IDSP22304 550 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 DUSP3P51452 185 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 ACTN3Q08043 901 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms