RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 AIF1P55008 147 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 CREB5Q02930 508 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 BYSLQ13895 437 aaKnown RBP17.13■□□□□ 0.33
CBWD3-211ENST00000615061 DLG2Q15700 870 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 ERMARDQ5T6L9 678 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 METTL3Q86U44 580 aaKnown RBP17.13■□□□□ 0.33
CBWD3-211ENST00000615061 FAM124AQ86V42 546 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 C11orf74Q86VG3 221 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 STK40Q8N2I9 435 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 SH2D3CQ8N5H7 860 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 DCAF4L2Q8NA75 395 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 TOE1Q96GM8 510 aaKnown RBP17.13■□□□□ 0.33
CBWD3-211ENST00000615061 MRFAP1L1Q96HT8 127 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 CCDC42Q96M95 316 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 KCTD15Q96SI1 283 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-211ENST00000615061 EPAS1Q99814 870 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 C2orf49Q9BVC5 232 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-211ENST00000615061 RSPH9Q9H1X1 276 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-211ENST00000615061 ATP13A1Q9HD20 1204 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 USP18Q9UMW8 372 aa17.13■□□□□ 0.33
CBWD3-211ENST00000615061 ATP9BO43861 1147 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 SMTNL2Q2TAL5 461 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 TXNRD3NBQ6F5E7 133 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 Q6ZVU0 165 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 LPCAT2Q7L5N7 544 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 MMAAQ8IVH4 418 aaKnown RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 FAM129BQ96TA1 746 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 NOL6Q9H6R4 1146 aaKnown RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 WSB2Q9NYS7 404 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 HS3ST2Q9Y278 367 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 BNIP3LO60238 219 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 CD6P30203 668 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 MPLP40238 635 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 MAPKAPK2P49137 400 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 KRT83P78385 493 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ARF5P84085 180 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF776Q68DI1 518 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF783Q6ZMS7 281 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 SLC41A1Q8IVJ1 513 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 RTL3Q8N8U3 475 aaKnown RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ATP11CQ8NB49 1132 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF564Q8TBZ8 553 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-211ENST00000615061 SEMA4GQ9NTN9 838 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 CTTNBP2NLQ9P2B4 639 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 SERGEFQ9UGK8 458 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 DOCK9Q9BZ29 2069 aa17.12■□□□□ 0.33
CBWD3-211ENST00000615061 ATXN2Q99700 1313 aaKnown RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 BCLAF3A2AJT9 711 aaKnown RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 DNTTP04053 509 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 H2AFZP0C0S5 128 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 C7P10643 843 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 ITPKAP23677 461 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 PCK1P35558 622 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 TPI1P60174 286 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 PIGHQ14442 188 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 PPP6R3Q5H9R7 873 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 IL31Q6EBC2 164 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 TCEAL6Q6IPX3 200 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 LEKR1Q6ZMV7 388 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 H2AFVQ71UI9 128 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 CTNNBL1Q8WYA6 563 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 TCEAL3Q969E4 200 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 ACE2Q9BYF1 805 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 ZWILCHQ9H900 591 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 FBRSQ9HAH7 460 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 OSGEPQ9NPF4 335 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 TMEM74BQ9NUR3 256 aa17.11■□□□□ 0.33
CBWD3-211ENST00000615061 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.11■□□□□ 0.33
CBWD3-211ENST00000615061 MYO1FO00160 1098 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 MID1O15344 667 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 RAMP2O60895 175 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 CD160O95971 181 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 GOT1P17174 413 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 ACSL1P33121 698 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 VASPP50552 380 aaPredicted RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 METAP1P53582 386 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 SF3A2Q15428 464 aaKnown RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 PLA2G2CQ5R387 149 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 SLC36A4Q6YBV0 504 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 NIPA2Q8N8Q9 360 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 NETO2Q8NC67 525 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 PIGKQ92643 395 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 IP6K2Q9UHH9 426 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 EEF2KO00418 725 aaKnown RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 NDUFS2O75306 463 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 IGLV3-19P01714 112 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 PSMD8P48556 350 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 SLC25A11Q02978 314 aaKnown RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF33AQ06730 810 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 ELAVL3Q14576 367 aaKnown RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 ACAP1Q15027 740 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 POLD3Q15054 466 aaPredicted RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 CST6Q15828 149 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms