RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MAK16Q9BXY0 300 aaKnown RBP13.57□□□□□ -0.24
MDC1-209ENST00000613547 IRF2BPLQ9H1B7 796 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 FBRSQ9HAH7 460 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 PRDM16Q9HAZ2 1276 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 BCCIPQ9P287 314 aaKnown RBP eCLIP13.57□□□□□ -0.24
MDC1-209ENST00000613547 AMFRQ9UKV5 643 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 MYOFQ9NZM1 2061 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 A0A0U1RQJ8 604 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 TCRBV21S2A2A0A5A6 115 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 GRID2IPA4D2P6 1211 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 ANTXRLA6NF34 631 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 MIF4GDA9UHW6 222 aaKnown RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 WASH3PC4AMC7 463 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 DCLK1O15075 740 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 SNAP91O60641 907 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.24
MDC1-209ENST00000613547 CD48P09326 243 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 PRKCHP24723 683 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 HOXA6P31267 233 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 ARSEP51690 589 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 HNRNPA1L2Q32P51 320 aaKnown RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 ANKRD20A8PQ5CZ79 823 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 METTL3Q86U44 580 aaKnown RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 CCDC50Q8IVM0 306 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 UBL4BQ8N7F7 174 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 LRRC57Q8N9N7 239 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 ATP11CQ8NB49 1132 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 RAPGEF5Q92565 580 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 RPL10LQ96L21 214 aaKnown RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 CCDC114Q96M63 670 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 RNF157Q96PX1 679 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 HHIPQ96QV1 700 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 ACE2Q9BYF1 805 aaPredicted RBP13.56□□□□□ -0.24
MDC1-209ENST00000613547 SLCO3A1Q9UIG8 710 aa13.56□□□□□ -0.24
MDC1-209ENST00000613547 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 A0A1W2PQF6 199 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 K7ESF4 209 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 DFFAO00273 331 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 KDELR3O43731 214 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 ZMPSTE24O75844 475 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 HLA-EP13747 358 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 ZFXP17010 805 aaPredicted RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 IL4RP24394 825 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 CTNNA2P26232 953 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 ACVRL1P37023 503 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 STK19P49842 368 aaPredicted RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 PTPN5P54829 565 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 RWDD2BP57060 319 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 SERINC3Q13530 473 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 ANO7Q6IWH7 933 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 TMEM92Q6UXU6 159 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 RCOR2Q8IZ40 523 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 PGBD3Q8N328 593 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 EXD1Q8NHP7 514 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 CASKIN2Q8WXE0 1202 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 FAF2Q96CS3 445 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 CELF6Q96J87 481 aaKnown RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 SLC39A8Q9C0K1 460 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 NOL6Q9H6R4 1146 aaKnown RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 LRRC19Q9H756 370 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 C2orf42Q9NWW7 574 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
MDC1-209ENST00000613547 PCDHA3Q9Y5H8 950 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 RAD54BQ9Y620 910 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 CAPN6Q9Y6Q1 641 aa13.55□□□□□ -0.24
MDC1-209ENST00000613547 CCDC163A0A0D9SF12 145 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 TTC34A8MYJ7 566 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 APOL1O14791 398 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 AXIN1O15169 862 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 ATP9BO43861 1147 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 FTCDO95954 541 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 SP9P0CG40 484 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 SRCP12931 536 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 RECQLP46063 649 aaPredicted RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 SERPINH1P50454 418 aaKnown RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 PAPOLAP51003 745 aaKnown RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 COPS2P61201 443 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 TFDP2Q14188 446 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 DLG2Q15700 870 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 AFMIDQ63HM1 303 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 HEATR6Q6AI08 1181 aaKnown RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 ZC3H14Q6PJT7 736 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms