RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	C1orf74	Q96LT6	269 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PIGV	Q9NUD9	493 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	ARHGEF38	Q9NXL2	777 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	SLC25A13	Q9UJS0	675 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	VPS28	Q9UK41	221 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	VANGL2	Q9ULK5	521 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	HS3ST4	Q9Y661	456 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	FASN	P49327	2511 aa	Known RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TRABD2B	A6NFA1	517 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	DRGX	A6NNA5	263 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508		M0QYT0	321 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	ENC1	O14682	589 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	MAGEC1	O60732	1142 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	RNGTT	O60942	597 aa	Known RBP	11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	RTN2	O75298	545 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	GRAP2	O75791	330 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	F9	P00740	461 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	ITGAV	P06756	1048 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	GABRB2	P47870	512 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	METAP1	P53582	386 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	CNTN1	Q12860	1018 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	NME3	Q13232	169 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	DLG2	Q15700	870 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	MAN2A1	Q16706	1144 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	ARTN	Q5T4W7	220 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	NEK5	Q6P3R8	708 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	C14orf80	Q86SX3	495 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	PRPF39	Q86UA1	669 aa	Known RBP	11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	SLC47A2	Q86VL8	602 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	SPATS2	Q86XZ4	545 aa	Known RBP	11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	GATAD2A	Q86YP4	633 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	PREB	Q9HCU5	417 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	DNAJC12	Q9UKB3	198 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	RAX	Q9Y2V3	346 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	PAXBP1	Q9Y5B6	917 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	ADAMTS20	P59510	1910 aa		11.43	□□□□□ -0.58
CBWD1-222	ENST00000613508	IGLV3-10	A0A075B6K4	115 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508		A0A087WV48	116 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	GOLGA8CP	A6NN73	597 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	C1QTNF3-AMACR	E9PGA6	284 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	PRAMEF26	H0Y7S4	382 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508		I6L893	689 aa	Predicted RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	ADCY5	O95622	1261 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	LDOC1	O95751	146 aa	Predicted RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	SRC	P12931	536 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	HOXB3	P14651	431 aa	Predicted RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	MTIF2	P46199	727 aa	Known RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	ACADVL	P49748	655 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	CLCN6	P51797	869 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	TAS2R38	P59533	333 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	KRT83	P78385	493 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	ILK	Q13418	452 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	CAMK4	Q16566	473 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	SLC25A52	Q3SY17	297 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	ACCSL	Q4AC99	568 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	SETMAR	Q53H47	684 aa	Predicted RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	PRAMEF14	Q5SWL7	426 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	OR6B2	Q6IFH4	312 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	DHRS13	Q6UX07	377 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508		Q6ZVU0	165 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	ARC	Q7LC44	396 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	BNIPL	Q7Z465	357 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	SETD3	Q86TU7	594 aa	Predicted RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	FAM114A1	Q8IWE2	563 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	CACTIN-AS1	Q8N1I8	211 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	TMEM145	Q8NBT3	493 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	TMEM35B	Q8NCS4	154 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	TMIE	Q8NEW7	156 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	PIP4K2C	Q8TBX8	421 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	CNDP2	Q96KP4	475 aa	Known RBP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	PSMB7	Q99436	277 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	TKTL2	Q9H0I9	626 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	NDST4	Q9H3R1	872 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	SYNC	Q9H7C4	482 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	ANLN	Q9NQW6	1124 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	COX16	Q9P0S2	106 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	STAP1	Q9ULZ2	295 aa		11.42	□□□□□ -0.58
CBWD1-222	ENST00000613508	TP53BP1	Q12888	1972 aa	Predicted RBP	11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	CXorf51A	A0A1B0GTR3	108 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	FAM149A	A5PLN7	773 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	RFPL3	O75679	317 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	CNTN5	O94779	1100 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	LSM8	O95777	96 aa	Known RBP	11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	MT-CO1	P00395	513 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	CYP11B1	P15538	503 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	TFE3	P19532	575 aa	Predicted RBP	11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	ERCC5	P28715	1186 aa	Predicted RBP	11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	CYP4F3	Q08477	520 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	CCDC15	Q0P6D6	951 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	VWA3B	Q502W6	1294 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	MIIP	Q5JXC2	388 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	PIP5KL1	Q5T9C9	394 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	ZNF783	Q6ZMS7	281 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	PDZD3	Q86UT5	571 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	MARCH9	Q86YJ5	346 aa		11.41	□□□□□ -0.58
CBWD1-222	ENST00000613508	CREBRF	Q8IUR6	639 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms