RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 DLG2Q15700 870 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 ACCSLQ4AC99 568 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 AASDHQ4L235 1098 aaPredicted RBP12.98□□□□□ -0.33
CSTF1-208ENST00000613138 ZNF776Q68DI1 518 aaPredicted RBP12.98□□□□□ -0.33
CSTF1-208ENST00000613138 SPECC1LQ69YQ0 1117 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 TXNRD3NBQ6F5E7 133 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 CHST14Q8NCH0 376 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 SYN2Q92777 582 aaPredicted RBP12.98□□□□□ -0.33
CSTF1-208ENST00000613138 NTAN1Q96AB6 310 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 VCPIP1Q96JH7 1222 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 KCTD15Q96SI1 283 aaPredicted RBP12.98□□□□□ -0.33
CSTF1-208ENST00000613138 SNRNP25Q9BV90 132 aaKnown RBP12.98□□□□□ -0.33
CSTF1-208ENST00000613138 PARVAQ9NVD7 372 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 MFHAS1Q9Y4C4 1052 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 PAXBP1Q9Y5B6 917 aa12.98□□□□□ -0.33
CSTF1-208ENST00000613138 LNP1A1A4G5 178 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 DCDC2BA2VCK2 349 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 CBFA2T2O43439 604 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ATP9BO43861 1147 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ZNF821O75541 412 aaPredicted RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 CTSLP07711 333 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 MIPP30301 263 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ID4P47928 161 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 GALCP54803 685 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ARF5P84085 180 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 NRG1Q02297 640 aaPredicted RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 GNA12Q03113 381 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 SCAPQ12770 1279 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 SEMA3BQ13214 749 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 CST6Q15828 149 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 SMTNL2Q2TAL5 461 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 CCDC122Q5T0U0 273 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 SETD3Q86TU7 594 aaPredicted RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 TP53INP2Q8IXH6 220 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 GANCQ8TET4 914 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 PABPC3Q9H361 631 aaKnown RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ATP13A1Q9HD20 1204 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 PPARGC1AQ9UBK2 798 aaKnown RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 SLC25A13Q9UJS0 675 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 PILRBQ9UKJ0 227 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 AP4E1Q9UPM8 1137 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 PCDHGA5Q9Y5G8 931 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSTF1-208ENST00000613138 CABIN1Q9Y6J0 2220 aa12.97□□□□□ -0.33
CSTF1-208ENST00000613138 ILVBLA1L0T0 632 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ANKRD62A6NC57 917 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 FAM47DPA6NHR8 397 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 PRR5-ARHGAP8B1AHC4 643 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 MFAP3LO75121 409 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 LRCH4O75427 683 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 IL1BP01584 269 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 IGLV3-19P01714 112 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 DNTTP04053 509 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 RHOQP17081 205 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 EPHB2P29323 1055 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 GKP32189 559 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 SLC8A1P32418 973 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ARHGAP8P85298 464 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 SULT2A1Q06520 285 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ARID5BQ14865 1188 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ASTE1Q2TB18 679 aaPredicted RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 EFHC2Q5JST6 749 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 C6orf118Q5T5N4 469 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 DCAF12L1Q5VU92 463 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ALKBH5Q6P6C2 394 aaKnown RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 SLC36A4Q6YBV0 504 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 RGL4Q8IZJ4 473 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 C12orf50Q8NA57 414 aaPredicted RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 DCAF4L2Q8NA75 395 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ATP11CQ8NB49 1132 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 SNX19Q92543 992 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ARHGEF2Q92974 986 aaKnown RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 NUP85Q9BW27 656 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 DHX35Q9H5Z1 703 aaKnown RBP12.96□□□□□ -0.33
CSTF1-208ENST00000613138 VPS45Q9NRW7 570 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 ABHD10Q9NUJ1 306 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
CSTF1-208ENST00000613138 TRPM6Q9BX84 2022 aa12.95□□□□□ -0.34
CSTF1-208ENST00000613138 TARSL2A2RTX5 802 aaKnown RBP12.95□□□□□ -0.34
CSTF1-208ENST00000613138 MEI4A8MW99 385 aa12.95□□□□□ -0.34
CSTF1-208ENST00000613138 RNASEH2AO75792 299 aaKnown RBP12.95□□□□□ -0.34
CSTF1-208ENST00000613138 CFIP05156 583 aa12.95□□□□□ -0.34
CSTF1-208ENST00000613138 CYP1A2P05177 515 aa12.95□□□□□ -0.34
CSTF1-208ENST00000613138 GOT1P17174 413 aa12.95□□□□□ -0.34
CSTF1-208ENST00000613138 L1CAMP32004 1257 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms