RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 INPP5DQ92835 1189 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 PBXIP1Q96AQ6 731 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CYP2S1Q96SQ9 504 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 DCUN1D5Q9BTE7 237 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 FBXO44Q9H4M3 255 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 RBMX2Q9Y388 322 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 NBASA2RRP1 2371 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 DYTNA2CJ06 578 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 ZSCAN9O15535 394 aaPredicted RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 ALADP13716 330 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 GARSP41250 739 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 OXCT1P55809 520 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CNGA3Q16281 694 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 GPR158Q5T848 1215 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 SDE2Q6IQ49 451 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 KLC3Q6P597 504 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CHPFQ8IZ52 775 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 PTPRN2Q92932 1015 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 RPL10LQ96L21 214 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 COMMD3-BMI1R4GMX3 469 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CUL9Q8IWT3 2517 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 A0A1W2PQH9 124 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 ABLIM1O14639 778 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 C8AP07357 584 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 ITGA2BP08514 1039 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 GZMAP12544 262 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PRKCIP41743 596 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PPIGQ13427 754 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 20.9
FAM3A-221ENST00000612856 MYBPC2Q14324 1141 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PDK1Q15118 436 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 HECTD3Q5T447 861 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 C3orf62Q6ZUJ4 267 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 SCUBE1Q8IWY4 988 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 POU5F2Q8N7G0 328 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 BBS2Q9BXC9 721 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 MRPL1Q9BYD6 325 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 POPDC2Q9HBU9 364 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 C20orf96Q9NUD7 363 aaPredicted RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 TMCO1Q9UM00 188 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 CEP350Q5VT06 3117 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 GSC2O15499 205 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 ADCY6O43306 1168 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PEX1O43933 1283 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 GOT1P17174 413 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 GNAZP19086 355 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 CHRM3P20309 590 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 ITPRIPL1Q6GPH6 555 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 TTC27Q6P3X3 843 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 ZDHHC24Q6UX98 284 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 LGMNQ99538 433 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 TUBB6Q9BUF5 446 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 KLHL4Q9C0H6 718 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 Q9H521 79 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 CHST7Q9NS84 486 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 NDRG2Q9UN36 371 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 CACNA1EQ15878 2313 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 RBM47A0AV96 593 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 SYNCRIPO60506 623 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 C4BPAP04003 597 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 STAT4Q14765 748 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 C1orf220Q5T0J3 134 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PRPF39Q86UA1 669 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 FBXO22Q8NEZ5 403 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 TFB1MQ8WVM0 346 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 MFSD14AQ96MC6 490 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PRPF18Q99633 342 aaKnown RBP11.05□□□□□ -0.64
FAM3A-221ENST00000612856 TMEM120AQ9BXJ8 343 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 NINJ2Q9NZG7 142 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 TMEM59LQ9UK28 342 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 PTPRJQ12913 1337 aa11.05□□□□□ -0.64
FAM3A-221ENST00000612856 STX7O15400 261 aaKnown RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 WFS1O76024 890 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 RPLP2P05387 115 aaKnown RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 IQCF3P0C7M6 154 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 MAGEA8P43361 318 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 SLC5A3P53794 718 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 DMPKQ09013 629 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 POLD3Q15054 466 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 LRRC73Q5JTD7 316 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TXNDC8Q6A555 127 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 OR52E8Q6IFG1 317 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 FRA10AC1Q70Z53 315 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 OTOAQ7RTW8 1153 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 CLNKQ7Z7G1 428 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TTC7BQ86TV6 843 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ITIH5Q86UX2 942 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 RGL4Q8IZJ4 473 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NUP93Q8N1F7 819 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 PYROXD2Q8N2H3 581 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 LRRC57Q8N9N7 239 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ANKRD52Q8NB46 1076 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms