RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SLC39A8Q9C0K1 460 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 RNF38Q9H0F5 515 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 CENPHQ9H3R5 247 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 LRRC4CQ9HCJ2 640 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ZNF334Q9HCZ1 680 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 EIF2B3Q9NR50 452 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 NDFIP2Q9NV92 336 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 KLHL8Q9P2G9 620 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 A0A087WUV0 522 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C2orf78A6NCI8 922 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 F5H5T6 163 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 RASGRF2O14827 1237 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 LPXNO60711 386 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 STC2O76061 302 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 CNTN5O94779 1100 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C1RP00736 705 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C8AP07357 584 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 VSIG8P0DPA2 414 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TSHRP16473 764 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 DNAJB1P25685 340 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 PHBP35232 272 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 LMAN1P49257 510 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 STAT4Q14765 748 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 FASTKD3Q14CZ7 662 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 BBS9Q3SYG4 887 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 CCDC38Q502W7 563 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ALFQ53S48 1182 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 DNAJC21Q5F1R6 531 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 HP1BP3Q5SSJ5 553 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 SYCP2LQ5T4T6 812 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 PLPP4Q5VZY2 271 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 NADSYN1Q6IA69 706 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 CHSY1Q86X52 802 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ELMOD1Q8N336 334 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 FAM76AQ8TAV0 307 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ZSCAN18Q8TBC5 510 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 MICAL1Q8TDZ2 1067 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 DEPDC1BQ8WUY9 529 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 LRRC39Q96DD0 335 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 PGM2Q96G03 612 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TEKT5Q96M29 485 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C17orf80Q9BSJ5 609 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 CEP41Q9BYV8 373 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 XAB2Q9HCS7 855 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 MTCL1Q9Y4B5 1905 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 GOLGA6L7A0A1B0GV03 622 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 TLDC2A0PJX2 215 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ARHGAP42A6NI28 874 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 HIDE1A8MVS5 230 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 MATN3O15232 486 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 BANF1O75531 89 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 OLFM2O95897 454 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 JCHAINP01591 159 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 IVLP07476 585 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 MBL2P11226 248 aaPredicted RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 MLNP12872 115 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 CCNB1P14635 433 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 NDUFV2P19404 249 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 PSMB4P28070 264 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 GABRR2P28476 465 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 OR1E1P30953 314 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 MAGEA3P43357 314 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 MAPKAPK2P49137 400 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 PAPOLAP51003 745 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 CLCN4P51793 760 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 IFI35P80217 286 aaPredicted RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ZBTB17Q13105 803 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 FAM133BQ5BKY9 247 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 RABGAP1LQ5R372 815 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 PPM1LQ5SGD2 360 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ARHGAP36Q6ZRI8 547 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 TFAP2DQ7Z6R9 452 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 CAND1Q86VP6 1230 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ANKMY2Q8IV38 441 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 DENND1CQ8IV53 801 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 PALM2Q8IXS6 379 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 LGI2Q8N0V4 545 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ATP11CQ8NB49 1132 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 FBXO36Q8NEA4 188 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 MRPS31Q92665 395 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 FATE1Q969F0 183 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 SAMD11Q96NU1 681 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 AGAP3Q96P47 875 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 DDX50Q9BQ39 737 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 LRRC3Q9BY71 257 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 NOL6Q9H6R4 1146 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 VPS37BQ9H9H4 285 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 TRPC7Q9HCX4 862 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 GKN1Q9NS71 199 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 BCCIPQ9P287 314 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ZNF212Q9UDV6 495 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 RSPH14Q9UHP6 348 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 IPO11Q9UI26 975 aaKnown RBP9.11□□□□□ -0.95
CCDC47-207ENST00000612558 TEX264Q9Y6I9 313 aa9.11□□□□□ -0.95
CCDC47-207ENST00000612558 ERI2A8K979 691 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 RASA4BC9J798 803 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 RGS16O15492 202 aaPredicted RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 PSMD3O43242 534 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms