RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 ZNF419Q96HQ0 510 aaPredicted RBP12.32□□□□□ -0.44
CLK4-215ENST00000611733 CEP41Q9BYV8 373 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 PRDM16Q9HAZ2 1276 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 NYNRINQ9P2P1 1898 aaKnown RBP12.32□□□□□ -0.44
CLK4-215ENST00000611733 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 KCNK1O00180 336 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 PEX11BO96011 259 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 RBL1P28749 1068 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 PAFAH1B1P43034 410 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 OXCT1P55809 520 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
CLK4-215ENST00000611733 PFKPQ01813 784 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 AP1B1Q10567 949 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 CCNG2Q16589 344 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 TJAP1Q5JTD0 557 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 FSTL4Q6MZW2 842 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 ZNF783Q6ZMS7 281 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 TPRG1Q6ZUI0 275 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 RALGPS2Q86X27 583 aaPredicted RBP12.32□□□□□ -0.44
CLK4-215ENST00000611733 TERB1Q8NA31 727 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 TMEM121Q9BTD3 319 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 PDFQ9HBH1 243 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 RBM12Q9NTZ6 932 aaKnown RBP12.32□□□□□ -0.44
CLK4-215ENST00000611733 DONSONQ9NYP3 566 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
CLK4-215ENST00000611733 K7EQS6 105 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 SMAD6O43541 496 aaKnown RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 PRAMEF11O60813 436 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 EGFP01133 1207 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 GDF10P55107 478 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 C2orf54Q08AI8 447 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 PDK1Q15118 436 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 OASLQ15646 514 aaKnown RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 ATPAF2Q8N5M1 289 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 LRRN4CLQ8ND94 238 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 USP33Q8TEY7 942 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 MAGOHBQ96A72 148 aaKnown RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 HDAC11Q96DB2 347 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 C8orf33Q9H7E9 229 aaPredicted RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 USP29Q9HBJ7 922 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 ELOVL2Q9NXB9 296 aa12.31□□□□□ -0.44
CLK4-215ENST00000611733 MTF2Q9Y483 593 aaPredicted RBP12.31□□□□□ -0.44
CLK4-215ENST00000611733 A0A0A0MRY4 1105 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 ETS1P14921 441 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 ETFBP38117 255 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 EIF2DP41214 584 aaKnown RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 GRIA2P42262 883 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 SLC10A7Q0GE19 358 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 SLC12A1Q13621 1099 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 MLF2Q15773 248 aaPredicted RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 PTPRNQ16849 979 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 KLHL7Q8IXQ5 586 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 AHI1Q8N157 1196 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 DCAF4L2Q8NA75 395 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 GLIS1Q8NBF1 620 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 MAIP1Q8WWC4 291 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 FAM3CQ92520 227 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 MRGPRX3Q96LB0 322 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 TSGA13Q96PP4 275 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 ACOX2Q99424 681 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 NAP1L3Q99457 506 aaPredicted RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 MTG2Q9H4K7 406 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 MIA3Q5JRA6 1907 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 TTC24A2A3L6 582 aaPredicted RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 WASH3PC4AMC7 463 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 MCF2LO15068 1137 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 MX2P20592 715 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 CCNCP24863 283 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 SEC13P55735 322 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 ZBTB17Q13105 803 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 XRCC4Q13426 336 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 BYSLQ13895 437 aaKnown RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 CYTH1Q15438 398 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 CYP1B1Q16678 543 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 WHAMMP3Q1A5X7 153 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 SLC45A4Q5BKX6 768 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 CCDC13Q8IYE1 715 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 ZNF366Q8N895 744 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 FAM71DQ8N9W8 422 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
CLK4-215ENST00000611733 ERLEC1Q96DZ1 483 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 MYO19Q96H55 970 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 QKIQ96PU8 341 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLK4-215ENST00000611733 CARD6Q9BX69 1037 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 SP110Q9HB58 689 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 NDRG2Q9UN36 371 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms