RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 NCKAP1Q9Y2A7 1128 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 NUMA1Q14980 2115 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 KCNK3O14649 394 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 TBL1XO60907 577 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 SERPINC1P01008 464 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 C6P13671 934 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 CHRNB2P17787 502 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 NOS2P35228 1153 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 TPM4P67936 248 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 FMO1Q01740 532 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 ZSCAN23Q3MJ62 389 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 FAM102AQ5T9C2 384 aaPredicted RBP19.81■□□□□ 0.76
SGMS1-208ENST00000608287 XYLT1Q86Y38 959 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 LSMEM2Q8N112 164 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 ATP6V0D2Q8N8Y2 350 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 FAM181AQ8N9Y4 354 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 ZNF397Q8NF99 534 aaPredicted RBP19.81■□□□□ 0.76
SGMS1-208ENST00000608287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.81■□□□□ 0.76
SGMS1-208ENST00000608287 STIM2Q9P246 746 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 CLCA2Q9UQC9 943 aa19.81■□□□□ 0.76
SGMS1-208ENST00000608287 TYW5A2RUC4 315 aaKnown RBP19.8■□□□□ 0.76
SGMS1-208ENST00000608287 GOLGA8SH3BPF8 625 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 GLDCP23378 1020 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 NME3Q13232 169 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 SLC45A4Q5BKX6 768 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 PCSK4Q6UW60 755 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 LUZP1Q86V48 1076 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 HJURPQ8NCD3 748 aaPredicted RBP19.8■□□□□ 0.76
SGMS1-208ENST00000608287 WFIKKN2Q8TEU8 576 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 RFFLQ8WZ73 363 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 BTN2A3PQ96KV6 586 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 ZNF578Q96N58 590 aaPredicted RBP19.8■□□□□ 0.76
SGMS1-208ENST00000608287 IRX2Q9BZI1 471 aaPredicted RBP19.8■□□□□ 0.76
SGMS1-208ENST00000608287 NUCKS1Q9H1E3 243 aaKnown RBP19.8■□□□□ 0.76
SGMS1-208ENST00000608287 GDF3Q9NR23 364 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.8■□□□□ 0.767e-6■■□□□ 13.7
SGMS1-208ENST00000608287 SLC12A6Q9UHW9 1150 aa19.8■□□□□ 0.76
SGMS1-208ENST00000608287 XPO7Q9UIA9 1087 aaKnown RBP19.8■□□□□ 0.76
SGMS1-208ENST00000608287 M0QYT0 321 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 WISP1O95388 367 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 CYP1A1P04798 512 aaPredicted RBP19.79■□□□□ 0.76
SGMS1-208ENST00000608287 SLC2A3P11169 496 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 CCR1P32246 355 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 DNAJC3Q13217 504 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 EIF4EBP2Q13542 120 aaPredicted RBP19.79■□□□□ 0.76
SGMS1-208ENST00000608287 FNDC3BQ53EP0 1204 aaKnown RBP19.79■□□□□ 0.76
SGMS1-208ENST00000608287 MS4A13Q5J8X5 152 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 MPP7Q5T2T1 576 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 RAP1GAP2Q684P5 730 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 KIAA0895LQ68EN5 471 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 LAYNQ6UX15 382 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 TRIM72Q6ZMU5 477 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 USP30Q70CQ3 517 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 CHSY1Q86X52 802 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 GATAD2AQ86YP4 633 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 SAP25Q8TEE9 199 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 PRICKLE1Q96MT3 831 aaPredicted RBP19.79■□□□□ 0.76
SGMS1-208ENST00000608287 NAP1L5Q96NT1 182 aaPredicted RBP19.79■□□□□ 0.76
SGMS1-208ENST00000608287 ABCB8Q9NUT2 735 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 ADAMTS1Q9UHI8 967 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 SLCO1B1Q9Y6L6 691 aa19.79■□□□□ 0.76
SGMS1-208ENST00000608287 HECTD1Q9ULT8 2610 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 A0A1B0GTH6 734 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 A0A1W2PPC4 97 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 CYSRT1A8MQ03 144 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 KCNU1A8MYU2 1149 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 TACR2P21452 398 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 HLA-FP30511 346 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 SCNN1AP37088 669 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 SULT1E1P49888 294 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 RPS24P62847 133 aaKnown RBP19.78■□□□□ 0.76
SGMS1-208ENST00000608287 E2F1Q01094 437 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 ZNF776Q68DI1 518 aaPredicted RBP19.78■□□□□ 0.76
SGMS1-208ENST00000608287 LGI2Q8N0V4 545 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 CFAP52Q8N1V2 620 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 SLC30A5Q8TAD4 765 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 TSC1Q92574 1164 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 MYEOVQ96EZ4 313 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 SEPT11Q9NVA2 429 aaKnown RBP19.78■□□□□ 0.76
SGMS1-208ENST00000608287 RRN3Q9NYV6 651 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 GGA2Q9UJY4 613 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 STAP1Q9ULZ2 295 aa19.78■□□□□ 0.76
SGMS1-208ENST00000608287 GOLGA6L19H0YKK7 550 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 CCDC172P0C7W6 258 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 FERP16591 822 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 CKMT2P17540 419 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 EPHA8P29322 1005 aaPredicted RBP19.77■□□□□ 0.76
SGMS1-208ENST00000608287 TMEM215Q68D42 235 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 MMS22LQ6ZRQ5 1243 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 CHST9Q7L1S5 443 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 MFN1Q8IWA4 741 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 CCDC117Q8IWD4 279 aaPredicted RBP19.77■□□□□ 0.76
SGMS1-208ENST00000608287 CARNMT1Q8N4J0 409 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 EID2Q8N6I1 236 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 DCBLD1Q8N8Z6 715 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 ZNF557Q8N988 423 aaPredicted RBP19.77■□□□□ 0.76
SGMS1-208ENST00000608287 WFDC5Q8TCV5 224 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 SORCS1Q8WY21 1168 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 PCDHB18PQ96TA0 734 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 NPY6RQ99463 290 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms