RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 MSLNQ13421 630 aaPredicted RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 ERO1BQ86YB8 467 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ATG4CQ96DT6 458 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GPATCH1Q9BRR8 931 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 OSGEPQ9NPF4 335 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 USP32Q8NFA0 1604 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GABBR2O75899 941 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 LTFP02788 710 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ICAM1P05362 532 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ACO1P21399 889 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 POU6F1Q14863 301 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 SCAIQ8N9R8 606 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 DRAXINQ8NBI3 349 aaPredicted RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 FAM120BQ96EK7 910 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 NSMCE2Q96MF7 247 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 SLC24A2Q9UI40 661 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 SNX7Q9UNH6 387 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 A8MV72 311 aaPredicted RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 SERPINE1P05121 402 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 RRM1P23921 792 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 CHKAP35790 457 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 PHKG1Q16816 387 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 HHIPL2Q6UWX4 724 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 TBC1D21Q8IYX1 336 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ATP6V0D2Q8N8Y2 350 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 S100PBPQ96BU1 408 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 SLC4A5Q9BY07 1137 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 FBXO6Q9NRD1 293 aaPredicted RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 PIH1D1Q9NWS0 290 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 COMMD9Q9P000 198 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 VPS28Q9UK41 221 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 KANSL1LA0AUZ9 987 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 BIRC5O15392 142 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 COX4I1P13073 169 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 PDCD4Q53EL6 469 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 CEP41Q9BYV8 373 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 DCLK3Q9C098 648 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 PIK3C2BO00750 1634 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 GRB10Q13322 594 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CSHL1Q14406 222 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 SAMD4BQ5PRF9 694 aaKnown RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 MYO1HQ8N1T3 1032 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 WDR27A2RRH5 827 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 TOR1BO14657 336 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 HBP1O60381 514 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 WARSP23381 471 aaKnown RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 OXCT1P55809 520 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 PRKCQQ04759 706 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 SPDYCQ5MJ68 293 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 OGFOD2Q6N063 350 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CREG2Q8IUH2 290 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 LINC00116Q8NCU8 138 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 SEMA6BQ9H3T3 888 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 STARD7Q9NQZ5 370 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CYB561D2O14569 222 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ZC3H11AO75152 810 aaKnown RBP eCLIP8.82□□□□□ -1
CSMD1-216ENST00000602557 NAMPTP43490 491 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 BCAT1P54687 386 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CYP24A1Q07973 514 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 EPS8Q12929 822 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 TRIM28Q13263 835 aaKnown RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 NR6A1Q15406 480 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 NDUFAF6Q330K2 333 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ZNF571Q7Z3V5 609 aaPredicted RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 FRMD8P1Q9BZ68 369 aaPredicted RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 PTTG2Q9NZH5 202 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CLEC4AQ9UMR7 237 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 TFPTP0C1Z6 253 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 NPTX2P47972 431 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CYP4Z1Q86W10 505 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 RNASE11Q8TAA1 199 aaKnown RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 FARP2O94887 1054 aaPredicted RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 CYP11B2P19099 503 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 FAM131BQ86XD5 332 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CAMK1DQ8IU85 385 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 GSTCDQ8NEC7 633 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 SERAC1Q96JX3 654 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ZNF512BQ96KM6 892 aaPredicted RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 OSBPL11Q9BXB4 747 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 EBF3Q9H4W6 596 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 NCKIPSDQ9NZQ3 722 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ANAPC2Q9UJX6 822 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 MRPL42Q9Y6G3 142 aaKnown RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 UGT1A9O60656 530 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 KATNA1O75449 491 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 B3GAT3O94766 335 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 LRG1P02750 347 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ARF4P18085 180 aaPredicted RBP8.82□□□□□ -1
CSMD1-216ENST00000602557 UGT1A6P19224 532 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 UGT1A1P22309 533 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 UGT1A4P22310 534 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 WEE1P30291 646 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 UGT1A3P35503 534 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 UGT1A5P35504 534 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 CDK7P50613 346 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 ARHGAP15Q53QZ3 475 aa8.82□□□□□ -1
CSMD1-216ENST00000602557 OOSP2Q86WS3 158 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms