RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	MOCS2	O96007	188 aa	Predicted RBP	18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	APOE	P02649	317 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	THEGL	P0DJG4	465 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	C6	P13671	934 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	PDGFRA	P16234	1089 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	PRCP	P42785	496 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	PMS1	P54277	932 aa	Known RBP	18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	OXCT1	P55809	520 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	PITX1	P78337	314 aa	Predicted RBP	18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	C5orf22	Q49AR2	442 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	TCERG1L	Q5VWI1	586 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	GCNT7	Q6ZNI0	430 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	SLC22A18AS	Q8N1D0	253 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	PRR11	Q96HE9	360 aa	Predicted RBP	18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	APOLD1	Q96LR9	279 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	TRIM62	Q9BVG3	475 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	MIS12	Q9H081	205 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	GOLPH3L	Q9H4A5	285 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	CAAP1	Q9H8G2	361 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	HS3ST2	Q9Y278	367 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190	KIF26B	Q2KJY2	2108 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	UBR5	O95071	2799 aa	Predicted RBP	18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	C1QTNF3-AMACR	E9PGA6	284 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	TRUB2	O95900	331 aa	Known RBP	18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	CTSL	P07711	333 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	ACADSB	P45954	432 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	FMO5	P49326	533 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	DAB2	P98082	770 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	GCNT1	Q02742	428 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	VAC14	Q08AM6	782 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	TMEM259	Q4ZIN3	620 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	TAF1B	Q53T94	588 aa	Predicted RBP	18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	BROX	Q5VW32	411 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	TMEM110	Q86TL2	294 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	SH2D3C	Q8N5H7	860 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	OR13H1	Q8NG92	308 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	FAM174A	Q8TBP5	190 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	KCNE4	Q8WWG9	221 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	GRAMD1A	Q96CP6	724 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	NT5C1B	Q96P26	610 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	FEM1A	Q9BSK4	669 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	POPDC2	Q9HBU9	364 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.8	■□□□□ 0.6
IRF3-231	ENST00000602190	CEP83	Q9Y592	693 aa		18.8	■□□□□ 0.6
IRF3-231	ENST00000602190		F5H5T6	163 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190		K7ENP7	123 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	RIOK3	O14730	519 aa	Known RBP	18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	SCAMP1	O15126	338 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	USP12	O75317	370 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	CS	O75390	466 aa	Known RBP	18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	CALCA	P01258	141 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	LRMP	Q12912	555 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	DLG2	Q15700	870 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	ISX	Q2M1V0	245 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	ARHGAP40	Q5TG30	622 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	ANKRD40	Q6AI12	368 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	FBXL22	Q6P050	247 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	INO80C	Q6PI98	192 aa	Predicted RBP	18.79	■□□□□ 0.6
IRF3-231	ENST00000602190		Q6ZVU0	165 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	HORMAD1	Q86X24	394 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	CIR1	Q86X95	450 aa	Predicted RBP	18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	ATP6V0D2	Q8N8Y2	350 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	SPATA20	Q8TB22	786 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	FAM149B1	Q96BN6	582 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	NOX5	Q96PH1	765 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	THSD1	Q9NS62	852 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	ZFR2	Q9UPR6	939 aa	Known RBP	18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	TBC1D30	Q9Y2I9	924 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	PCDHB4	Q9Y5E5	795 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	PCDHGA8	Q9Y5G5	932 aa		18.79	■□□□□ 0.6
IRF3-231	ENST00000602190	CDRT15L2	A8MXV6	281 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	P4HA2	O15460	535 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	HNRNPA2B1	P22626	353 aa	Known RBP	18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	IRAK1	P51617	712 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	LRRC63	Q05C16	580 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	MED8	Q96G25	268 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	VCPIP1	Q96JH7	1222 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	SPATA32	Q96LK8	384 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	SLC46A1	Q96NT5	459 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	PPP1R9B	Q96SB3	815 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	DUSP23	Q9BVJ7	150 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	THAP9	Q9H5L6	903 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	METTL14	Q9HCE5	456 aa	Known RBP	18.78	■□□□□ 0.6
IRF3-231	ENST00000602190	DOCK4	Q8N1I0	1966 aa		18.78	■□□□□ 0.6
IRF3-231	ENST00000602190		A0A1W2PQU0	124 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190		K7ESM1	405 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	RNF103	O00237	685 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	ZNF202	O95125	648 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	PRLR	P16471	622 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	YWHAZ	P63104	245 aa	Known RBP	18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	LY6D	Q14210	128 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	RABGAP1L	Q5R372	815 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	CLEC14A	Q86T13	490 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	DCP2	Q8IU60	420 aa	Known RBP	18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	TMIE	Q8NEW7	156 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	OR2A12	Q8NGT7	310 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	ARRDC3	Q96B67	414 aa		18.77	■□□□□ 0.6
IRF3-231	ENST00000602190	NAF1	Q96HR8	494 aa	Known RBP	18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms