RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 DENND1CQ8IV53 801 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 NETO2Q8NC67 525 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 FBF1Q8TES7 1133 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 FCRL5Q96RD9 977 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 C17orf80Q9BSJ5 609 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 TBK1Q9UHD2 729 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 ZMYM5Q9UJ78 669 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 HIDE1A8MVS5 230 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 ANXA9O76027 345 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 CNTN5O94779 1100 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 AP2A1O95782 977 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 CPP00450 1065 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 POU2F2P09086 479 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 OR1E1P30953 314 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 STX2P32856 288 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 CYS1Q717R9 158 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 LINC00523Q86TU6 105 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 PDCD7Q8N8D1 485 aaKnown RBP20.46■□□□□ 0.87
PNKP-214ENST00000600573 BCAS4Q8TDM0 211 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 XPO6Q96QU8 1125 aaKnown RBP20.46■□□□□ 0.87
PNKP-214ENST00000600573 MAGEH1Q9H213 219 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 NOL6Q9H6R4 1146 aaKnown RBP20.46■□□□□ 0.87
PNKP-214ENST00000600573 INTS9Q9NV88 658 aaKnown RBP20.46■□□□□ 0.87
PNKP-214ENST00000600573 NDFIP2Q9NV92 336 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 SENP1Q9P0U3 644 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 PCDH10Q9P2E7 1040 aa20.46■□□□□ 0.87
PNKP-214ENST00000600573 LSM7Q9UK45 103 aaKnown RBP20.46■□□□□ 0.87
PNKP-214ENST00000600573 AGO1Q9UL18 857 aaKnown RBP20.46■□□□□ 0.87
PNKP-214ENST00000600573 TRAV19A0A0A6YYK7 116 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 SDR42E2A6NKP2 422 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 NEBLO76041 1014 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 ETFBP38117 255 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 EPHA5P54756 1037 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 ERVK-21P61565 698 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 IL10RBQ08334 325 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 ZBTB17Q13105 803 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 MTM1Q13496 603 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 ZNF534Q76KX8 674 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 SETD3Q86TU7 594 aaPredicted RBP20.45■□□□□ 0.87
PNKP-214ENST00000600573 IGDCC3Q8IVU1 814 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 CYP4X1Q8N118 509 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 MDM1Q8TC05 714 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 CFAP36Q96G28 342 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 ZNF599Q96NL3 588 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 AGAP3Q96P47 875 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 CYTH2Q99418 400 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 LRRC40Q9H9A6 602 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 TRPC7Q9HCX4 862 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 GKN1Q9NS71 199 aa20.45■□□□□ 0.87
PNKP-214ENST00000600573 MYO18AQ92614 2054 aaKnown RBP20.45■□□□□ 0.86
PNKP-214ENST00000600573 GOLGA6L7A0A1B0GV03 622 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 KLKB1P03952 638 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 PTPN2P17706 415 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 DNAJB1P25685 340 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 SMAD3P84022 425 aaKnown RBP20.45■□□□□ 0.86
PNKP-214ENST00000600573 TMCO4Q5TGY1 634 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 ARMC3Q5W041 872 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 ZNF783Q6ZMS7 281 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 TFAP2DQ7Z6R9 452 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 TRABD2AQ86V40 505 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 SRRM1Q8IYB3 904 aaKnown RBP20.45■□□□□ 0.86
PNKP-214ENST00000600573 DEPDC1BQ8WUY9 529 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 PAFAH2Q99487 392 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 EBNA1BP2Q99848 306 aaKnown RBP20.45■□□□□ 0.86
PNKP-214ENST00000600573 DHRS4Q9BTZ2 278 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 ATXN3LQ9H3M9 355 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 GLOD4Q9HC38 313 aa20.45■□□□□ 0.86
PNKP-214ENST00000600573 RBM22Q9NW64 420 aaKnown RBP eCLIP20.45■□□□□ 0.864e-6■■■□□ 16.3
PNKP-214ENST00000600573 ZC3H7BQ9UGR2 993 aaKnown RBP20.45■□□□□ 0.86
PNKP-214ENST00000600573 TMEM120BA0PK00 339 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 TYW5A2RUC4 315 aaKnown RBP20.44■□□□□ 0.86
PNKP-214ENST00000600573 H3BNC9 293 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 XYLBO75191 536 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 AVILO75366 819 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 BRAFP15056 766 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 CD68P34810 354 aaPredicted RBP20.44■□□□□ 0.86
PNKP-214ENST00000600573 SERINC3Q13530 473 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 FAM182AQ5T1J6 154 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 KCTD11Q693B1 232 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 TXNDC8Q6A555 127 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 NAPEPLDQ6IQ20 393 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 GAREM2Q75VX8 874 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 ARL14EPQ8N8R7 260 aaPredicted RBP20.44■□□□□ 0.86
PNKP-214ENST00000600573 ATXN2LQ8WWM7 1075 aaKnown RBP20.44■□□□□ 0.86
PNKP-214ENST00000600573 HMCESQ96FZ2 354 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 ZFRQ96KR1 1074 aaKnown RBP20.44■□□□□ 0.86
PNKP-214ENST00000600573 SIGLEC10Q96LC7 697 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 SP110Q9HB58 689 aa20.44■□□□□ 0.86
PNKP-214ENST00000600573 PPANQ9NQ55 473 aaKnown RBP20.44■□□□□ 0.86
PNKP-214ENST00000600573 DOCK4Q8N1I0 1966 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 NUP205Q92621 2012 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.43■□□□□ 0.86
PNKP-214ENST00000600573 A0A1B0GVM2 712 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 ILVBLA1L0T0 632 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 MAGEB16A2A368 324 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 TCAF2A6NFQ2 919 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 NDUFAB1O14561 156 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 NFKB1P19838 968 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 SLC6A4P31645 630 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 MSH2P43246 934 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms