RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SPON2Q9BUD6 331 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 OSBPL2Q9H1P3 480 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 CAPN10Q9HC96 672 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 PPARGC1AQ9UBK2 798 aaKnown RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 EIF2B4Q9UI10 523 aaKnown RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 VPS51Q9UID3 782 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 ASCC3Q8N3C0 2202 aaKnown RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 FAM47DPA6NHR8 397 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 FSBPO95073 299 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 ADH1BP00325 375 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 PLEKP08567 350 aaPredicted RBP23.16■■□□□ 1.3
CCDC9-204ENST00000599398 VASPP50552 380 aaPredicted RBP23.16■■□□□ 1.3
CCDC9-204ENST00000599398 ARTNQ5T4W7 220 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 Q6ZVU0 165 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 DNAAF5Q86Y56 855 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 SH2D3CQ8N5H7 860 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 DCAF4L2Q8NA75 395 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 OR7D4Q8NG98 312 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 OR8D1Q8WZ84 308 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 SERGEFQ9UGK8 458 aa23.16■■□□□ 1.3
CCDC9-204ENST00000599398 NCOR2Q9Y618 2525 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 A0A1B0GTW7 788 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 ILVBLA1L0T0 632 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 FAM72CH0Y354 149 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 TM4SF5O14894 197 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 ATMINO43313 823 aaPredicted RBP23.15■■□□□ 1.3
CCDC9-204ENST00000599398 MT-CO1P00395 513 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 SYPP08247 313 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 SRCP12931 536 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 NRG1Q02297 640 aaPredicted RBP23.15■■□□□ 1.3
CCDC9-204ENST00000599398 TDRD12Q587J7 1177 aaKnown RBP23.15■■□□□ 1.3
CCDC9-204ENST00000599398 PPP1R15BQ5SWA1 713 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 FAM72AQ5TYM5 149 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 FAM72DQ6L9T8 149 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 SLFN11Q7Z7L1 901 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 DSG4Q86SJ6 1040 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 FAM72BQ86X60 149 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 HDDC3Q8N4P3 179 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 CPLX3Q8WVH0 158 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 NTAN1Q96AB6 310 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 TBC1D31Q96DN5 1066 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 CNPY3Q9BT09 278 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 MAGEB5Q9BZ81 275 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 NEUROG2Q9H2A3 272 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 ATP13A1Q9HD20 1204 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 PARVAQ9NVD7 372 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 IFNKQ9P0W0 207 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 ZNF212Q9UDV6 495 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 HS3ST2Q9Y278 367 aa23.15■■□□□ 1.3
CCDC9-204ENST00000599398 PCDH15Q96QU1 1955 aa23.14■■□□□ 1.3
CCDC9-204ENST00000599398 CBX4O00257 560 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 ARHGAP33O14559 1287 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 BCAT2O15382 392 aaPredicted RBP23.14■■□□□ 1.29
CCDC9-204ENST00000599398 LRIG2O94898 1065 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 FTLP02792 175 aaPredicted RBP23.14■■□□□ 1.29
CCDC9-204ENST00000599398 C5AR1P21730 350 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 GLDCP23378 1020 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 PBX1P40424 430 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 EFHC2Q5JST6 749 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 MANEALQ5VSG8 457 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 LINGO4Q6UY18 593 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 ZNF783Q6ZMS7 281 aa23.14■■□□□ 1.29
CCDC9-204ENST00000599398 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.14■■□□□ 1.29
CCDC9-204ENST00000599398 A0A1W2PQJ5 194 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 K7ERQ8 282 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 DDX3XO00571 662 aaKnown RBP eCLIP23.13■■□□□ 1.291e-9■□□□□ 9.8
CCDC9-204ENST00000599398 GZMAP12544 262 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 RHOQP17081 205 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 GNA12Q03113 381 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 MAMLD1Q13495 774 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 TMC6Q7Z403 805 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 AADATQ8N5Z0 425 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 BIRC7Q96CA5 298 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 DNAI1Q9UI46 699 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 FZD4Q9ULV1 537 aa23.13■■□□□ 1.29
CCDC9-204ENST00000599398 FARP1Q9Y4F1 1045 aaPredicted RBP23.13■■□□□ 1.29
CCDC9-204ENST00000599398 LRRC72A6NJI9 287 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 RTN2O75298 545 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 GOT1P17174 413 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 PSMA2P25787 234 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 MAPKAPK2P49137 400 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 GALCP54803 685 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 OGDHQ02218 1023 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 SCAPQ12770 1279 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 POM121L1PQ3SYA9 428 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 FAM46CQ5VWP2 391 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 KIAA0895LQ68EN5 471 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 PLEKHA7Q6IQ23 1121 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 RETSATQ6NUM9 610 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 NCEH1Q6PIU2 408 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 PYROXD2Q8N2H3 581 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 MINDY1Q8N5J2 469 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 KNL1Q8NG31 2342 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 OR2I1PQ8NGU4 316 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 OR14C36Q8NHC7 312 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 ZNF653Q96CK0 615 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 CCDC114Q96M63 670 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC9-204ENST00000599398 ADAMTS1Q9UHI8 967 aa23.12■■□□□ 1.29
CCDC9-204ENST00000599398 C1QTNF3-AMACRE9PGA6 284 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms