RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 MRE11P49959 708 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 COPAP53621 1224 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 YBEYP58557 167 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 KRT81Q14533 505 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 ELAVL3Q14576 367 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 DPYSL2Q16555 572 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 SMTNL2Q2TAL5 461 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 RFX8Q6ZV50 586 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 ARFGAP1Q8N6T3 406 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 ATP11CQ8NB49 1132 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 OR52K2Q8NGK3 314 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 RUBCNQ92622 972 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 ARHGEF2Q92974 986 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 MYO19Q96H55 970 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 LOXL4Q96JB6 756 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 PHOX2BQ99453 314 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 PRSS16Q9NQE7 514 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 MYO15AQ9UKN7 3530 aa12.34□□□□□ -0.43
ARHGEF1-216ENST00000598587 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 TTC34A8MYJ7 566 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ALOX15BO15296 676 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 NRDCO43847 1150 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ATP9BO43861 1147 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SIN3BO75182 1162 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 NDUFS2O75306 463 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ADH1BP00325 375 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 GOT1P17174 413 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SERPINB6P35237 376 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 GJC1P36383 396 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 DPP6P42658 865 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SLC1A1P43005 524 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 RECQLP46063 649 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 NUMBP49757 651 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 NDST2P52849 883 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SLC25A11Q02978 314 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SRSF5Q13243 272 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 MESDQ14696 234 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 KCNT1Q5JUK3 1230 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ZFYVE27Q5T4F4 411 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 DAB2IPQ5VWQ8 1189 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 LPCAT2Q7L5N7 544 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 MAP7D3Q8IWC1 876 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 UMODL1-AS1Q8N2C9 162 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 LZTR1Q8N653 840 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SUMF1Q8NBK3 374 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 OR7D4Q8NG98 312 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 OR8D1Q8WZ84 308 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 PSMB7Q99436 277 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 CEP44Q9C0F1 390 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 MKRN2Q9H000 416 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 RSPH9Q9H1X1 276 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 RCOR3Q9P2K3 495 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 SLCO3A1Q9UIG8 710 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 NCKAP1Q9Y2A7 1128 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 PCDHA13Q9Y5I0 950 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 EPN1Q9Y6I3 576 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
ARHGEF1-216ENST00000598587 A0A0A6YYK5 440 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 TMEM110-MUSTN1A8MSY1 372 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 SNAP91O60641 907 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 RARAP10276 462 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 SRCP12931 536 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 NOP2P46087 812 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 SERPINH1P50454 418 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 HADHBP55084 474 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 CDH6P55285 790 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 RPL6Q02878 288 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 PDK2Q15119 407 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 TCEAL1Q15170 157 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 DLG2Q15700 870 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 CA9Q16790 459 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 PLK5Q496M5 336 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 C9orf64Q5T6V5 341 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 FAM46CQ5VWP2 391 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 PMS2CLQ68D20 193 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 C22orf39Q6P5X5 142 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 TMCO3Q6UWJ1 677 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 POLNQ7Z5Q5 900 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 KBTBD6Q86V97 674 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 CACUL1Q86Y37 369 aa12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 GPR161Q8N6U8 529 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 PCDH20Q8N6Y1 951 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-216ENST00000598587 CASKIN2Q8WXE0 1202 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms