RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 CREG2Q8IUH2 290 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 RASGEF1CQ8N431 466 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 PRSS33Q8NF86 280 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 FAF2Q96CS3 445 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 CSPG4P5Q96PW8 444 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 FEM1AQ9BSK4 669 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 OSBPL8Q9BZF1 889 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 CACNA2D2Q9NY47 1150 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 RCOR3Q9P2K3 495 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-207ENST00000597136 TTC7AQ9ULT0 858 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-207ENST00000597136 TBC1D30Q9Y2I9 924 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 OR51B4Q9Y5P0 310 aa15.37■□□□□ 0.05
TRIM28-207ENST00000597136 hCG_1818297A0A087WSY0 165 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 A0A0D9SEW6 157 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 H3BRJ5 948 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 EEF2KO00418 725 aaKnown RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 KRT10P13645 584 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 OR1E1P30953 314 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 ARL4AP40617 200 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 CXCL12P48061 93 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TUBB2AQ13885 445 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 ZNF234Q14588 700 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 ANGPT1Q15389 498 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 PTPRNQ16849 979 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 PLEKHG6Q3KR16 790 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 MAMSTRQ6ZN01 415 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 RFX8Q6ZV50 586 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 NLRP14Q86W24 1093 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 CCDC117Q8IWD4 279 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 AHI1Q8N157 1196 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TTC17Q96AE7 1141 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TBC1D31Q96DN5 1066 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 CAPZA3Q96KX2 299 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 RNF157Q96PX1 679 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 HERPUD2Q9BSE4 406 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TUBB2BQ9BVA1 445 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 HEMGNQ9BXL5 484 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 RRAGDQ9NQL2 400 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 THAP10Q9P2Z0 257 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 CDC23Q9UJX2 597 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 EFR3BQ9Y2G0 817 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 H0Y858 1186 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 K7ESF4 209 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 LAMTOR5O43504 91 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 FGGP02679 453 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 POLR2EP19388 210 aaKnown RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 COL9A1P20849 921 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 EPHB2P29323 1055 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 HTR7P34969 479 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 IL12RB1P42701 662 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 PXNP49023 591 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 PLK1P53350 603 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TPI1P60174 286 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 CSTF1Q05048 431 aaKnown RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 DMWDQ09019 674 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TCF15Q12870 199 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 DPYSQ14117 519 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 DMC1Q14565 340 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 KAZNQ674X7 775 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 SLC13A5Q86YT5 568 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 ZNF366Q8N895 744 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 NETO2Q8NC67 525 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 OR7D4Q8NG98 312 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 PCDH19Q8TAB3 1148 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 ACTRT1Q8TDG2 376 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 WFIKKN2Q8TEU8 576 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 RPL10LQ96L21 214 aaKnown RBP15.36■□□□□ 0.05
TRIM28-207ENST00000597136 MMP17Q9ULZ9 603 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 MRFAP1Q9Y605 127 aa15.36■□□□□ 0.05
TRIM28-207ENST00000597136 TIMM44O43615 452 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 ATG13O75143 517 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 RHOCP08134 193 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 HLA-EP13747 358 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 RHOQP17081 205 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 GLDCP23378 1020 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 NTSR1P30989 418 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 ADCY2Q08462 1091 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 KIAA1211LQ6NV74 962 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 SYT13Q7L8C5 426 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 CHPFQ8IZ52 775 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 PQLC3Q8N755 202 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 MYO19Q96H55 970 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 MRGPRX3Q96LB0 322 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 MAK16Q9BXY0 300 aaKnown RBP15.35■□□□□ 0.05
TRIM28-207ENST00000597136 MTG2Q9H4K7 406 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 NOL6Q9H6R4 1146 aaKnown RBP15.35■□□□□ 0.05
TRIM28-207ENST00000597136 TMEM248Q9NWD8 314 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 SMARCAL1Q9NZC9 954 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 RNF14Q9UBS8 474 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 SLCO3A1Q9UIG8 710 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 RAD54BQ9Y620 910 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 STON1Q9Y6Q2 735 aa15.35■□□□□ 0.05
TRIM28-207ENST00000597136 TCRBV7S2A1N4TA0A589 114 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 PGRMC1O00264 195 aaKnown RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 PDE2AO00408 941 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 DAPK3O43293 454 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 SNAP91O60641 907 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 TJP3O95049 919 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 DLDP09622 509 aaKnown RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 TDGF1P13385 188 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms