RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-205ENST00000595797 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.13□□□□□ -0.31
PAF1-205ENST00000595797 SYNDIG1Q9H7V2 258 aa13.13□□□□□ -0.31
PAF1-205ENST00000595797 DNAJC28Q9NX36 388 aa13.13□□□□□ -0.31
PAF1-205ENST00000595797 IPO11Q9UI26 975 aaKnown RBP13.13□□□□□ -0.31
PAF1-205ENST00000595797 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
PAF1-205ENST00000595797 CA5BQ9Y2D0 317 aa13.13□□□□□ -0.31
PAF1-205ENST00000595797 CFAP46Q8IYW2 2715 aa13.13□□□□□ -0.31
PAF1-205ENST00000595797 A0A1W2PQU0 124 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 KPNA3O00505 521 aaPredicted RBP13.12□□□□□ -0.31
PAF1-205ENST00000595797 ALOX15BO15296 676 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 PIAS2O75928 621 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 PCDH8O95206 1070 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 CETN1Q12798 172 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 C6orf132Q5T0Z8 1188 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 CDCP2Q5VXM1 449 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 PMF1Q6P1K2 205 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
PAF1-205ENST00000595797 SLC25A45Q8N413 288 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 FAM174AQ8TBP5 190 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 GLMNQ92990 594 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 GRAMD1AQ96CP6 724 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 NT5C1BQ96P26 610 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 SEMA4CQ9C0C4 833 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 FAM204AQ9H8W3 233 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 UCKL1Q9NWZ5 548 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 KIF26BQ2KJY2 2108 aa13.12□□□□□ -0.31
PAF1-205ENST00000595797 ATMQ13315 3056 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 A6NNZ2 444 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 SLC2A3P11169 496 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 ACADSBP45954 432 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 RECQLP46063 649 aaPredicted RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 NFATC3Q12968 1075 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 ZNF177Q13360 481 aaPredicted RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 DLG2Q15700 870 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 CNGA2Q16280 664 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 CBWD6Q4V339 395 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 CBWD3Q5JTY5 395 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 CBWD5Q5RIA9 395 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 AGBL4Q5VU57 503 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 KIAA1614Q5VZ46 1190 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 ZCCHC8Q6NZY4 707 aaKnown RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 NEK5Q6P3R8 708 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 RBM44Q6ZP01 1051 aaKnown RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 Q6ZVU0 165 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 TAC4Q86UU9 113 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 DCP2Q8IU60 420 aaKnown RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 PPM1KQ8N3J5 372 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 SLC35F5Q8WV83 523 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 PPP1R16AQ96I34 528 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 RPRD1AQ96P16 312 aaPredicted RBP13.11□□□□□ -0.31
PAF1-205ENST00000595797 MUC3BQ9H195 1237 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 NAALADL1Q9UQQ1 740 aa13.11□□□□□ -0.31
PAF1-205ENST00000595797 RP1P56715 2156 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 SYNJ2BP-COX16A0A087WUM0 186 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 MCF2LO15068 1137 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 CMA1P23946 247 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 RPIAP49247 311 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 CSRP3P50461 194 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 METAP1P53582 386 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 KRT83P78385 493 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 CDKN3Q16667 212 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 ZC3H12AQ5D1E8 599 aaKnown RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 EFL1Q7Z2Z2 1120 aaKnown RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 HORMAD1Q86X24 394 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 CIR1Q86X95 450 aaPredicted RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 OR13H1Q8NG92 308 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 TTC9Q92623 222 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 IFT43Q96FT9 208 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 ASCL3Q9NQ33 180 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.1□□□□□ -0.31
PAF1-205ENST00000595797 COX16Q9P0S2 106 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
PAF1-205ENST00000595797 SARDHQ9UL12 918 aa13.1□□□□□ -0.31
PAF1-205ENST00000595797 KCNU1A8MYU2 1149 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 K7ENP7 123 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 K7ESM1 405 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 SCAMP1O15126 338 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
PAF1-205ENST00000595797 PRNPP04156 253 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 MYF5P13349 255 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 MTA1Q13330 715 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 ZNF542PQ5EBM4 170 aa13.09□□□□□ -0.31
PAF1-205ENST00000595797 INO80CQ6PI98 192 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms