RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 SRGAP2O75044 1071 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 FLT3P36888 993 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 GRK6P43250 576 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 GABRB2P47870 512 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 C5orf22Q49AR2 442 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 BRMS1LQ5PSV4 323 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 CCNI2Q6ZMN8 369 aaPredicted RBP17.48■□□□□ 0.39
CCDC9-202ENST00000595659 DSG4Q86SJ6 1040 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 ZNF683Q8IZ20 524 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 SH2D3CQ8N5H7 860 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 ATP11CQ8NB49 1132 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 PIP4K2CQ8TBX8 421 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 SLC20A1Q8WUM9 679 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 NT5C3BQ969T7 300 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 STK33Q9BYT3 514 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 PPM1HQ9ULR3 514 aa17.48■□□□□ 0.39
CCDC9-202ENST00000595659 FAM149AA5PLN7 773 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 C10orf142B7Z368 130 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 F8VZ95 297 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 CBX4O00257 560 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 GFPT2O94808 682 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 ENDOD1O94919 500 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 SRCP12931 536 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 GLDCP23378 1020 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 RRM1P23921 792 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 MTA1Q13330 715 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 SHBQ15464 509 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 SLC25A52Q3SY17 297 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 RAB6CQ53S08 254 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 FAM46CQ5VWP2 391 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 LRRC31Q6UY01 552 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 PRPF39Q86UA1 669 aaKnown RBP17.47■□□□□ 0.39
CCDC9-202ENST00000595659 FAM131BQ86XD5 332 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 EMC1Q8N766 993 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 SKA1Q96BD8 255 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 CFAP57Q96MR6 1250 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 ELF4Q99607 663 aaPredicted RBP17.47■□□□□ 0.39
CCDC9-202ENST00000595659 RAB6CQ9H0N0 254 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 LMBRD1Q9NUN5 540 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 ARHGAP20Q9P2F6 1191 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 VPS51Q9UID3 782 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 CA5BQ9Y2D0 317 aa17.47■□□□□ 0.39
CCDC9-202ENST00000595659 DRGXA6NNA5 263 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 E9PAM4 449 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 C1QTNF3-AMACRE9PGA6 284 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 TLR4O00206 839 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 RNF103O00237 685 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 MCF2LO15068 1137 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 SMAD6O43541 496 aaKnown RBP17.46■□□□□ 0.39
CCDC9-202ENST00000595659 TNFSF14O43557 240 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 PLRG1O43660 514 aaKnown RBP17.46■□□□□ 0.39
CCDC9-202ENST00000595659 F9P00740 461 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 CAPNS1P04632 268 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 CTSLP07711 333 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-202ENST00000595659 NOMO3P69849 1222 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 KRT83P78385 493 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 ATP11AP98196 1134 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 AGBL4Q5VU57 503 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 SMYD5Q6GMV2 418 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 CHST14Q8NCH0 376 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 OR7D4Q8NG98 312 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 EPS8L1Q8TE68 723 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 KLK6Q92876 244 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 PGAP3Q96FM1 320 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-202ENST00000595659 MYOCQ99972 504 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 SPON2Q9BUD6 331 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 GANQ9H2C0 597 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 TNKS2Q9H2K2 1166 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 TMEM59LQ9UK28 342 aa17.46■□□□□ 0.39
CCDC9-202ENST00000595659 LATO43561 262 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 DKK1O94907 266 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 GJB6O95452 261 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 ITGAVP06756 1048 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 EEF1GP26641 437 aaKnown RBP17.45■□□□□ 0.38
CCDC9-202ENST00000595659 NXPH1P58417 271 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 POLR2FP61218 127 aaKnown RBP17.45■□□□□ 0.38
CCDC9-202ENST00000595659 BNIP3Q12983 259 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 KRT31Q15323 416 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 ARTNQ5T4W7 220 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 DHRS13Q6UX07 377 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 EID2Q8N6I1 236 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 OR2A12Q8NGT7 310 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 SLC30A5Q8TAD4 765 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 MDM1Q8TC05 714 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 ENOX1Q8TC92 643 aaKnown RBP17.45■□□□□ 0.38
CCDC9-202ENST00000595659 C1orf74Q96LT6 269 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 C2orf49Q9BVC5 232 aaPredicted RBP17.45■□□□□ 0.38
CCDC9-202ENST00000595659 NLRC4Q9NPP4 1024 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 GDF3Q9NR23 364 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 METTL5Q9NRN9 209 aaKnown RBP17.45■□□□□ 0.38
CCDC9-202ENST00000595659 FAM207AQ9NSI2 230 aaPredicted RBP17.45■□□□□ 0.38
CCDC9-202ENST00000595659 FTSJ1Q9UET6 329 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 HS3ST2Q9Y278 367 aa17.45■□□□□ 0.38
CCDC9-202ENST00000595659 KPNA3O00505 521 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-202ENST00000595659 EPHB6O15197 1021 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 DFNA5O60443 496 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 LSM8O95777 96 aaKnown RBP17.44■□□□□ 0.38
CCDC9-202ENST00000595659 CHRNB2P17787 502 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 OR1E1P30953 314 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms