RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 FAM129BQ96TA1 746 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 ACE2Q9BYF1 805 aaPredicted RBP22.44■■□□□ 1.18
HOMER3-206ENST00000594439 ATP13A1Q9HD20 1204 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 TNRC6BQ9UPQ9 1833 aaKnown RBP22.44■■□□□ 1.18
HOMER3-206ENST00000594439 PTPRZ1P23471 2315 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-206ENST00000594439 MAP3K13O43283 966 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 IGLV3-19P01714 112 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 SRCP12931 536 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 ACVRL1P37023 503 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 TPMTP51580 245 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 TPI1P60174 286 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 DLG2Q15700 870 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 ZNF776Q68DI1 518 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-206ENST00000594439 SLC36A4Q6YBV0 504 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 ARHGEF2Q92974 986 aaKnown RBP22.43■■□□□ 1.18
HOMER3-206ENST00000594439 PANX2Q96RD6 677 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 HINFPQ9BQA5 517 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 MAGEH1Q9H213 219 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 NOL6Q9H6R4 1146 aaKnown RBP22.43■■□□□ 1.18
HOMER3-206ENST00000594439 CATSPERBQ9H7T0 1116 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 GVINP1Q7Z2Y8 2422 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 NUP205Q92621 2012 aa22.43■■□□□ 1.18
HOMER3-206ENST00000594439 CBX4O00257 560 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 EEF2KO00418 725 aaKnown RBP22.42■■□□□ 1.18
HOMER3-206ENST00000594439 FGF10O15520 208 aaPredicted RBP22.42■■□□□ 1.18
HOMER3-206ENST00000594439 RAMP2O60895 175 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 FECHP22830 423 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 ETFBP38117 255 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 ARF5P84085 180 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 SLC25A11Q02978 314 aaKnown RBP22.42■■□□□ 1.18
HOMER3-206ENST00000594439 ZBTB16Q05516 673 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 BOLA3Q53S33 107 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 TXNRD3NBQ6F5E7 133 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 LINGO4Q6UY18 593 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 LPCAT2Q7L5N7 544 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 STK40Q8N2I9 435 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 PARD6AQ9NPB6 346 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 OSGEPQ9NPF4 335 aa22.42■■□□□ 1.18
HOMER3-206ENST00000594439 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 K7ERQ8 282 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 SMAD6O43541 496 aaKnown RBP22.41■■□□□ 1.18
HOMER3-206ENST00000594439 PROSCO94903 275 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 RARAP10276 462 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 ACADMP11310 421 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 TGM1P22735 817 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 CDC25BP30305 580 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 RPL6Q02878 288 aaKnown RBP22.41■■□□□ 1.18
HOMER3-206ENST00000594439 POLD3Q15054 466 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-206ENST00000594439 ACCSLQ4AC99 568 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 KCNT1Q5JUK3 1230 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 IL31Q6EBC2 164 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 RETSATQ6NUM9 610 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 CPNE8Q86YQ8 564 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 TMEFF1Q8IYR6 380 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 UMODL1-AS1Q8N2C9 162 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 ZWILCHQ9H900 591 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 WSB2Q9NYS7 404 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-206ENST00000594439 INTUQ9ULD6 942 aa22.41■■□□□ 1.18
HOMER3-206ENST00000594439 LCA5LO95447 670 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 CD160O95971 181 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 GOT1P17174 413 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 CD6P30203 668 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 OXTRP30559 389 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 HCAR3P49019 387 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 CLCN6P51797 869 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 ZNF135P52742 658 aaPredicted RBP22.4■■□□□ 1.18
HOMER3-206ENST00000594439 SLC20A2Q08357 652 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 ELAVL3Q14576 367 aaKnown RBP22.4■■□□□ 1.18
HOMER3-206ENST00000594439 DPYSL2Q16555 572 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 SMTNL2Q2TAL5 461 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 PPP6R3Q5H9R7 873 aaPredicted RBP22.4■■□□□ 1.18
HOMER3-206ENST00000594439 SPDYCQ5MJ68 293 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 RFX8Q6ZV50 586 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 Q6ZVU0 165 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 ATP11CQ8NB49 1132 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 SLC35G2Q8TBE7 412 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 TEKT4Q8WW24 435 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 TOE1Q96GM8 510 aaKnown RBP22.4■■□□□ 1.18
HOMER3-206ENST00000594439 ARRDC1-AS1Q9H2J1 176 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 CWC15Q9P013 229 aaKnown RBP22.4■■□□□ 1.18
HOMER3-206ENST00000594439 PCDHGA5Q9Y5G8 931 aa22.4■■□□□ 1.18
HOMER3-206ENST00000594439 NUMA1Q14980 2115 aa22.39■■□□□ 1.18
HOMER3-206ENST00000594439 CXorf51AA0A1B0GTR3 108 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 BCLAF3A2AJT9 711 aaKnown RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 RNASEH1O60930 286 aaKnown RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 LRP3O75074 770 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 MTA2O94776 668 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 DNTTP04053 509 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 PTGER3P43115 390 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 DHPSP49366 369 aaPredicted RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 SERPINH1P50454 418 aaKnown RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 YBEYP58557 167 aaPredicted RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 SPEM2Q0P670 501 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 CST6Q15828 149 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 MMAAQ8IVH4 418 aaKnown RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 CCDC170Q8IYT3 715 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 HSPH1Q92598 858 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 KLC2Q9H0B6 622 aa22.39■■□□□ 1.17
HOMER3-206ENST00000594439 PABPC3Q9H361 631 aaKnown RBP22.39■■□□□ 1.17
HOMER3-206ENST00000594439 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms